RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MITD1Q8WV92 249 aa20.2■□□□□ 0.82
VEGFA-231ENST00000640499 CORTO00230 105 aa20.19■□□□□ 0.82
VEGFA-231ENST00000640499 DEFB114Q30KQ6 69 aa20.19■□□□□ 0.82
VEGFA-231ENST00000640499 TMEM190Q8WZ59 177 aa20.19■□□□□ 0.82
VEGFA-231ENST00000640499 SELENOKQ9Y6D0 94 aa20.19■□□□□ 0.82
VEGFA-231ENST00000640499 FAM240BA0A1B0GVZ2 78 aa20.18■□□□□ 0.82
VEGFA-231ENST00000640499 C8orf88P0DMB2 117 aa20.18■□□□□ 0.82
VEGFA-231ENST00000640499 DEFB121Q5J5C9 76 aa20.18■□□□□ 0.82
VEGFA-231ENST00000640499 COQ8AQ8NI60 647 aa20.18■□□□□ 0.82
VEGFA-231ENST00000640499 HIPK2Q9H2X6 1198 aa20.18■□□□□ 0.82
VEGFA-231ENST00000640499 IGHV3OR16-8A0A075B7F1 116 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 NDUFA4O00483 81 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 LY86O95711 162 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 TMEM50AO95807 157 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 CD300EQ496F6 205 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-231ENST00000640499 MZT2BQ6NZ67 158 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 DUSP18Q8NEJ0 188 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 SEC22CQ9BRL7 303 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 GAR1Q9NY12 217 aaKnown RBP20.17■□□□□ 0.82
VEGFA-231ENST00000640499 MLXQ9UH92 298 aa20.17■□□□□ 0.82
VEGFA-231ENST00000640499 FAM90A26D6RGX4 464 aa20.16■□□□□ 0.82
VEGFA-231ENST00000640499 H2AFB2P0C5Z0 115 aa20.16■□□□□ 0.82
VEGFA-231ENST00000640499 NPY1RP25929 384 aa20.16■□□□□ 0.82
VEGFA-231ENST00000640499 OPRK1P41145 380 aa20.16■□□□□ 0.82
VEGFA-231ENST00000640499 UXS1Q8NBZ7 420 aa20.16■□□□□ 0.82
VEGFA-231ENST00000640499 U3KQ87 197 aa20.16■□□□□ 0.82
VEGFA-231ENST00000640499 NUPL2O15504 423 aaKnown RBP20.15■□□□□ 0.82
VEGFA-231ENST00000640499 GNG7O60262 68 aa20.15■□□□□ 0.82
VEGFA-231ENST00000640499 ELLP55199 621 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-231ENST00000640499 Q8N1Y9 231 aa20.15■□□□□ 0.82
VEGFA-231ENST00000640499 OR4X1Q8NH49 305 aa20.15■□□□□ 0.82
VEGFA-231ENST00000640499 RNASEH2CQ8TDP1 164 aaKnown RBP20.15■□□□□ 0.82
VEGFA-231ENST00000640499 MAGT1Q9H0U3 335 aa20.15■□□□□ 0.82
VEGFA-231ENST00000640499 ZNF785A8K8V0 405 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 IAPPP10997 89 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 NPBWR1P48145 328 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 ID3Q02535 119 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 PRSS54Q6PEW0 395 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 OR4D5Q8NGN0 318 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 OR10C1Q96KK4 312 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 UFC1Q9Y3C8 167 aa20.14■□□□□ 0.81
VEGFA-231ENST00000640499 CLN5O75503 358 aa20.13■□□□□ 0.81
VEGFA-231ENST00000640499 IFNA10P01566 189 aa20.13■□□□□ 0.81
VEGFA-231ENST00000640499 ZNF431Q8TF32 576 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-231ENST00000640499 PALMDQ9NP74 551 aa20.13■□□□□ 0.81
VEGFA-231ENST00000640499 TECRQ9NZ01 308 aaKnown RBP20.13■□□□□ 0.81
VEGFA-231ENST00000640499 C15orf62A8K5M9 175 aa20.12■□□□□ 0.81
VEGFA-231ENST00000640499 ZNF207O43670 478 aaKnown RBP20.12■□□□□ 0.81
VEGFA-231ENST00000640499 NRARPQ7Z6K4 114 aa20.12■□□□□ 0.81
VEGFA-231ENST00000640499 OR2K2Q8NGT1 345 aa20.12■□□□□ 0.81
VEGFA-231ENST00000640499 C20orf24Q9BUV8 137 aa20.12■□□□□ 0.81
VEGFA-231ENST00000640499 MRPL27Q9P0M9 148 aaKnown RBP20.12■□□□□ 0.81
VEGFA-231ENST00000640499 K7EMT4 169 aa20.11■□□□□ 0.81
VEGFA-231ENST00000640499 SYNGR2O43760 224 aa20.11■□□□□ 0.81
VEGFA-231ENST00000640499 IGKV1-17P01599 117 aa20.11■□□□□ 0.81
VEGFA-231ENST00000640499 RELQ04864 619 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-231ENST00000640499 DYNLRB2Q8TF09 96 aa20.11■□□□□ 0.81
VEGFA-231ENST00000640499 IFNA21P01568 189 aa20.1■□□□□ 0.81
VEGFA-231ENST00000640499 LCN12Q6JVE5 192 aa20.1■□□□□ 0.81
VEGFA-231ENST00000640499 BTNL8Q6UX41 500 aa20.1■□□□□ 0.81
VEGFA-231ENST00000640499 TOMM20LQ6UXN7 152 aa20.1■□□□□ 0.81
VEGFA-231ENST00000640499 TMEM116Q8NCL8 245 aa20.1■□□□□ 0.81
VEGFA-231ENST00000640499 MARC2Q969Z3 335 aa20.1■□□□□ 0.81
VEGFA-231ENST00000640499 ZFAND3Q9H8U3 227 aa20.1■□□□□ 0.81
VEGFA-231ENST00000640499 DAZ1Q9NQZ3 744 aaKnown RBP20.1■□□□□ 0.81
VEGFA-231ENST00000640499 COL7A1Q02388 2944 aa20.09■□□□□ 0.81
VEGFA-231ENST00000640499 CCSO14618 274 aa20.09■□□□□ 0.81
VEGFA-231ENST00000640499 MED6O75586 246 aa20.09■□□□□ 0.81
VEGFA-231ENST00000640499 POLR2GP62487 172 aaKnown RBP eCLIP20.09■□□□□ 0.81
VEGFA-231ENST00000640499 CD69Q07108 199 aa20.09■□□□□ 0.81
VEGFA-231ENST00000640499 TMEM61Q8N0U2 210 aa20.09■□□□□ 0.81
VEGFA-231ENST00000640499 WDR89Q96FK6 387 aaPredicted RBP20.09■□□□□ 0.81
VEGFA-231ENST00000640499 RPS10-NUDT3A0A1W2PQS6 291 aa20.08■□□□□ 0.81
VEGFA-231ENST00000640499 WRBO00258 174 aa20.08■□□□□ 0.81
VEGFA-231ENST00000640499 IGLC1P0CG04 106 aa20.08■□□□□ 0.81
VEGFA-231ENST00000640499 RND2P52198 227 aa20.08■□□□□ 0.81
VEGFA-231ENST00000640499 ATP5IP56385 69 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-231ENST00000640499 TIGITQ495A1 244 aa20.08■□□□□ 0.81
VEGFA-231ENST00000640499 NOXA1Q86UR1 476 aa20.08■□□□□ 0.81
VEGFA-231ENST00000640499 ZBTB8BQ8NAP8 495 aaPredicted RBP20.08■□□□□ 0.81
VEGFA-231ENST00000640499 ENKURQ8TC29 256 aa20.08■□□□□ 0.81
VEGFA-231ENST00000640499 YIF1AO95070 293 aa20.07■□□□□ 0.8
VEGFA-231ENST00000640499 IL5P05113 134 aa20.07■□□□□ 0.8
VEGFA-231ENST00000640499 SLC25A4P12235 298 aa20.07■□□□□ 0.8
VEGFA-231ENST00000640499 IAH1Q2TAA2 248 aaPredicted RBP20.07■□□□□ 0.8
VEGFA-231ENST00000640499 ZNF600Q6ZNG1 722 aa20.07■□□□□ 0.8
VEGFA-231ENST00000640499 SLC16A13Q7RTY0 426 aa20.07■□□□□ 0.8
VEGFA-231ENST00000640499 NPIPB3Q92617 1050 aa20.07■□□□□ 0.8
VEGFA-231ENST00000640499 PUS1Q9Y606 427 aaKnown RBP eCLIP20.07■□□□□ 0.8
VEGFA-231ENST00000640499 PRSS46E5RG02 174 aa20.06■□□□□ 0.8
VEGFA-231ENST00000640499 PAX9P55771 341 aa20.06■□□□□ 0.8
VEGFA-231ENST00000640499 C12orf45Q8N5I9 185 aaPredicted RBP20.06■□□□□ 0.8
VEGFA-231ENST00000640499 B9D2Q9BPU9 175 aa20.06■□□□□ 0.8
VEGFA-231ENST00000640499 SMPXQ9UHP9 88 aa20.06■□□□□ 0.8
VEGFA-231ENST00000640499 SMAD5-AS1Q9Y6J3 95 aa20.06■□□□□ 0.8
VEGFA-231ENST00000640499 IFNA4P05014 189 aa20.05■□□□□ 0.8
VEGFA-231ENST00000640499 NKX2-1P43699 371 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-231ENST00000640499 CIB3Q96Q77 187 aaPredicted RBP20.05■□□□□ 0.8
VEGFA-231ENST00000640499 IGHV3-49A0A0A0MS15 119 aa20.04■□□□□ 0.8
VEGFA-231ENST00000640499 IGHV7-4-1A0A0J9YVY3 117 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms