RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 SYNJ2BPP57105 145 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 S100A10P60903 97 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
GTF3A-209ENST00000640289 FAM209BQ5JX69 171 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 NOXA1Q86UR1 476 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
GTF3A-209ENST00000640289 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
GTF3A-209ENST00000640289 CCNKO75909 580 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 CTSGP08311 255 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 CXCL3P19876 107 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 ATP5IP56385 69 aaPredicted RBP10.1□□□□□ -0.79
GTF3A-209ENST00000640289 RAB11AP62491 216 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 RPP30P78346 268 aaKnown RBP10.1□□□□□ -0.79
GTF3A-209ENST00000640289 CD69Q07108 199 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 FCN2Q15485 313 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 OXLD1Q5BKU9 147 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 BSCL2Q96G97 398 aaPredicted RBP10.1□□□□□ -0.79
GTF3A-209ENST00000640289 RAB40CQ96S21 281 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 NMES1Q9C002 83 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 C11orf1Q9H5F2 150 aa10.1□□□□□ -0.79
GTF3A-209ENST00000640289 STRAPQ9Y3F4 350 aaKnown RBP10.1□□□□□ -0.79
GTF3A-209ENST00000640289 RPS10-NUDT3A0A1W2PQS6 291 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 PRSS46E5RG02 174 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 G3V4G9 280 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 L7N2F9 121 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 GNG7O60262 68 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 LY86O95711 162 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 FCGR2BP31994 310 aaPredicted RBP10.09□□□□□ -0.79
GTF3A-209ENST00000640289 NPBWR1P48145 328 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 RND2P52198 227 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 VAMP2P63027 116 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 LRRC37A5PQ49AS3 106 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 SLC16A13Q7RTY0 426 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 C1QL4Q86Z23 238 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 OR4X1Q8NH49 305 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 RCC1LQ96I51 464 aaKnown RBP10.09□□□□□ -0.79
GTF3A-209ENST00000640289 ZNF414Q96IQ9 312 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 TXN2Q99757 166 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 MED28Q9H204 178 aa10.09□□□□□ -0.79
GTF3A-209ENST00000640289 PMS2P5A8MQ11 134 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 CLN5O75503 358 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 SLC25A4P12235 298 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 EDN2P20800 178 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 TAS2R30P59541 319 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 ETFRF1Q6IPR1 90 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 SPSB3Q6PJ21 355 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 TMEM14EPQ6UXP3 125 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 UNQ9165/PRO28630Q6UXU0 137 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 OR11H7Q8NGC8 314 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 NPIPB3Q92617 1050 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 ACY3Q96HD9 319 aa10.08□□□□□ -0.8
GTF3A-209ENST00000640289 IGHV3OR16-8A0A075B7F1 116 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 FAM24AA6NFZ4 105 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 SEC14L6B5MCN3 397 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 H0YIZ8 118 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 NUPL2O15504 423 aaKnown RBP10.07□□□□□ -0.8
GTF3A-209ENST00000640289 TSC22D2O75157 780 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 SAP30O75446 220 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 DEDDO75618 318 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 METTL15P1P0C7V9 234 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 BCAP31P51572 246 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 RRAS2P62070 204 aaPredicted RBP10.07□□□□□ -0.8
GTF3A-209ENST00000640289 CYCSP99999 105 aaKnown RBP10.07□□□□□ -0.8
GTF3A-209ENST00000640289 GAMTQ14353 236 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 OR8G2PQ6IF36 304 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 IL34Q6ZMJ4 242 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 TMEM116Q8NCL8 245 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 OR9G4Q8NGQ1 327 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 PPP1R1CQ8WVI7 109 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 MCRIP2Q9BUT9 160 aaKnown RBP10.07□□□□□ -0.8
GTF3A-209ENST00000640289 ZNF436Q9C0F3 470 aaPredicted RBP10.07□□□□□ -0.8
GTF3A-209ENST00000640289 GAR1Q9NY12 217 aaKnown RBP10.07□□□□□ -0.8
GTF3A-209ENST00000640289 OR5AC2Q9NZP5 309 aa10.07□□□□□ -0.8
GTF3A-209ENST00000640289 WNK1Q9H4A3 2382 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 ZNF320A2RRD8 509 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 IGLC1P0CG04 106 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 PVALBP20472 110 aaPredicted RBP10.06□□□□□ -0.8
GTF3A-209ENST00000640289 GPX4P36969 197 aaPredicted RBP10.06□□□□□ -0.8
GTF3A-209ENST00000640289 CAV2P51636 162 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 ARL16Q0P5N6 197 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 TIGITQ495A1 244 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 FAM106AQ4KMX7 169 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 REC114Q7Z4M0 266 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 SLC35E1Q96K37 410 aa10.06□□□□□ -0.8
GTF3A-209ENST00000640289 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 LGALS9O00182 355 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 NDUFA4O00483 81 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 MPC2O95563 127 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 IGKV1-17P01599 117 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 RLN2P04090 185 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 CSN3P07498 182 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 OR10J1P30954 320 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 RELQ04864 619 aaPredicted RBP10.05□□□□□ -0.8
GTF3A-209ENST00000640289 C9orf66Q5T8R8 295 aa10.05□□□□□ -0.8
GTF3A-209ENST00000640289 ACOT7LQ6ZUV0 252 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms