RNA–Protein interactions for RNA: ENST00000639730.1

KCNMA1-270, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-270ENST00000639730 FOXG1P55316 489 aaPredicted RBP6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 PAX2Q02962 417 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 FOXF2Q12947 444 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 SRSF7Q16629 238 aaKnown RBP eCLIP6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 IBA57Q5T440 356 aaKnown RBP6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 H2BFWTQ7Z2G1 175 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 CXorf67Q86X51 503 aaPredicted RBP6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 C5orf17Q8NAS9 161 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 TMEM186Q96B77 213 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 LINC00479Q96M42 142 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 TMEM70Q9BUB7 260 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 MPC1Q9Y5U8 109 aa6.35□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A10PA6NDY2 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A18PA6NE21 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A16PA6NEW6 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A20PA6NIJ5 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A8PA6NJQ4 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A7PA6NKC0 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 ANKRD30BLA7E2S9 258 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 CYSRT1A8MQ03 144 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A22PA8MWA6 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A12PA8MX19 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A5PA8MXJ8 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A23PA8MXZ1 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 IGKV3-15P01624 115 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 OR10J4P0C629 311 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A15PP0C7V4 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A13PP0C7W8 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A14PP0C7W9 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM90A24PP0C7X0 464 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 VWC2Q2TAL6 325 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 VKORC1L1Q8N0U8 176 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 ABHD12Q8N2K0 398 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 RND1Q92730 232 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 RAB1CQ92928 201 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 GGTLC1Q9BX51 225 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 FAM234AQ9H0X4 552 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 TRGV10A0A0A0MS01 117 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 DEFB108AA8MXU0 73 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 G3V4G9 280 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 ZNF207O43670 478 aaKnown RBP6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 WISP2O76076 250 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 UBR5O95071 2799 aaPredicted RBP6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 AGFG2O95081 481 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 APOA2P02652 100 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 CEBPDP49716 269 aaPredicted RBP6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 MZT1Q08AG7 82 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 PSG5Q15238 335 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 SAMD13Q5VXD3 122 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 MIR17HGQ75NE6 70 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 RP1L1Q8IWN7 2480 aaPredicted RBP6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 OR52E5Q8NH55 327 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 JMJD8Q96S16 334 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 GTSF1LQ9H1H1 148 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 ZNF355PQ9NSJ1 428 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 PEF1Q9UBV8 284 aaKnown RBP6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 HILPDAQ9Y5L2 63 aa6.34□□□□□ -1.39
KCNMA1-270ENST00000639730 NCOR2Q9Y618 2525 aa6.34□□□□□ -1.4
KCNMA1-270ENST00000639730 IGHV3-43A0A0B4J1X8 118 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 IGLV1-44P01699 117 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 TFF1P04155 84 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 IGHV3-43DP0DP04 118 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 ZNF138P52744 262 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 RPS20P60866 119 aaKnown RBP6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 SMAGPQ0VAQ4 97 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 EFNB3Q15768 340 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 TIGITQ495A1 244 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 C12orf54Q6X4T0 127 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 WDR31Q8NA23 367 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 FOXC2Q99958 501 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 NPVFQ9HCQ7 196 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 PIGBOS1A0A0B4J2F0 54 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 C9JCJ5 164 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 H3BUT2 72 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 OR9G9P0C7N8 305 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 CEACAM21Q3KPI0 293 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 TRAT1Q6PIZ9 186 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 FAM216AQ8WUB2 273 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 RAB37Q96AX2 223 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 URB1-AS1Q96HZ7 61 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 NGBQ9NPG2 151 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 HEYLQ9NQ87 328 aaPredicted RBP6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 TPRP12270 2363 aaKnown RBP6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 LINC00473A8K010 186 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 CD5LO43866 347 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 HAND1O96004 215 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 LTC4SQ16873 150 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 OR4S2Q8NH73 311 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 OR4A5Q8NH83 315 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 CHODLQ9H9P2 273 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 SLC25A15Q9Y619 301 aa6.33□□□□□ -1.4
KCNMA1-270ENST00000639730 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 ZNF503-AS2A6NEH8 195 aa6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 A6NJY4 79 aa6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 IGHV3-13P01766 116 aa6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 IGHV3-7P01780 117 aa6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 P0C879 139 aa6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 OPRK1P41145 380 aa6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 C1orf159Q96HA4 380 aa6.32□□□□□ -1.4
KCNMA1-270ENST00000639730 SGK494Q96LW2 274 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms