RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CD177Q8N6Q3 437 aa13.79□□□□□ -0.2
SCARB2-210ENST00000638567 PARD6GQ9BYG4 376 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-210ENST00000638567 PAX9P55771 341 aa13.79□□□□□ -0.2
SCARB2-210ENST00000638567 CYYR1Q96J86 154 aa13.79□□□□□ -0.2
SCARB2-210ENST00000638567 UTRNP46939 3433 aa13.79□□□□□ -0.2
SCARB2-210ENST00000638567 TICRRQ7Z2Z1 1910 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 MBNL2Q5VZF2 373 aaKnown RBP13.78□□□□□ -0.2
SCARB2-210ENST00000638567 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 RAB37Q96AX2 223 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCARB2-210ENST00000638567 MUC21A0A0G2JKD1 596 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 MUC21A0A140T8X8 626 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 NDUFS6O75380 124 aaKnown RBP13.78□□□□□ -0.2
SCARB2-210ENST00000638567 MUC21Q5SSG8 566 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 C10orf55Q5SWW7 151 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 MGST2Q99735 147 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 RPP21Q9H633 154 aaKnown RBP13.78□□□□□ -0.2
SCARB2-210ENST00000638567 RABAC1Q9UI14 185 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 IGHV3OR16-13A0A075B7E8 117 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 IGHV3-74A0A0B4J1X5 117 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 CD33P20138 364 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 FOXL1Q12952 345 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 SRSF9Q13242 221 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCARB2-210ENST00000638567 LEMD1Q68G75 181 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 RELQ04864 619 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-210ENST00000638567 TMEM136Q6ZRR5 245 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 LINC01560Q8TB33 94 aa13.78□□□□□ -0.2
SCARB2-210ENST00000638567 ZFHX2Q9C0A1 2572 aaPredicted RBP13.77□□□□□ -0.2
SCARB2-210ENST00000638567 TRAV30A0A087WSZ9 112 aa13.77□□□□□ -0.2
SCARB2-210ENST00000638567 TRAV5A0A0B4J249 113 aa13.77□□□□□ -0.2
SCARB2-210ENST00000638567 FAM90A9PA6NNJ1 464 aa13.77□□□□□ -0.2
SCARB2-210ENST00000638567 C15orf62A8K5M9 175 aa13.77□□□□□ -0.2
SCARB2-210ENST00000638567 C2orf83Q53S99 150 aa13.77□□□□□ -0.2
SCARB2-210ENST00000638567 NPIPB11E5RHQ5 1161 aa13.77□□□□□ -0.21
SCARB2-210ENST00000638567 CD59P13987 128 aa13.77□□□□□ -0.21
SCARB2-210ENST00000638567 A0A1B0GUT8 65 aa13.77□□□□□ -0.21
SCARB2-210ENST00000638567 MLNRO43193 412 aa13.77□□□□□ -0.21
SCARB2-210ENST00000638567 FAM106CPP0CH98 169 aa13.77□□□□□ -0.21
SCARB2-210ENST00000638567 PET117Q6UWS5 81 aa13.77□□□□□ -0.21
SCARB2-210ENST00000638567 WFDC3Q8IUB2 231 aa13.77□□□□□ -0.21
SCARB2-210ENST00000638567 FOXA2Q9Y261 457 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-210ENST00000638567 B9A039 149 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 SNAI2O43623 268 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 ZNF324O75467 553 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-210ENST00000638567 MYOD1P15172 320 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 Q9H3A6 140 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 NUDT3O95989 172 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 HTN1P15515 57 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 GCSHP23434 173 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 MAP1LC3AQ9H492 121 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 RPUSD1Q9UJJ7 312 aaKnown RBP13.76□□□□□ -0.21
SCARB2-210ENST00000638567 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 LAMTOR2Q9Y2Q5 125 aa13.76□□□□□ -0.21
SCARB2-210ENST00000638567 COL4A3Q01955 1670 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 IGHV3OR16-8A0A075B7F1 116 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 ANOS1P23352 680 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 TANC1Q9C0D5 1861 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 GFRA3O60609 400 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 FOXH1O75593 365 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 GNB1LQ9BYB4 327 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 ELOVL5Q9NYP7 299 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 F11RQ9Y624 299 aaKnown RBP13.75□□□□□ -0.21
SCARB2-210ENST00000638567 IGHV1-46P01743 117 aa13.75□□□□□ -0.21
SCARB2-210ENST00000638567 APOHP02749 345 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-210ENST00000638567 MBNL3Q9NUK0 354 aaKnown RBP13.75□□□□□ -0.21
SCARB2-210ENST00000638567 IGLV3-1P01715 115 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 APOBEC3AP31941 199 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-210ENST00000638567 TEX45Q8NA69 505 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 LY6G6EA0A0G2JKS1 128 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 LOXL3P58215 753 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 RBPMS2Q6ZRY4 209 aaKnown RBP13.74□□□□□ -0.21
SCARB2-210ENST00000638567 MDS2Q8NDY4 140 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 CRIM1Q9NZV1 1036 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 EPDR1Q9UM22 224 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 U3KQA8 63 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 LOC105371242A0A075B767 164 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 IGHV3-23P01764 117 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 PSG9Q00887 426 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 METTL26Q96S19 204 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 DPM3Q9P2X0 92 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 TCRBV4S1A1TA0A5B7 111 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 IGKV1-39P01597 117 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 IGKV1D-39P04432 117 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 FAM53AQ6NSI3 398 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-210ENST00000638567 FAM57AQ8TBR7 257 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 PMCHL2Q9BQD1 86 aa13.74□□□□□ -0.21
SCARB2-210ENST00000638567 FOXI3A8MTJ6 420 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-210ENST00000638567 ACTL10Q5JWF8 245 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 LHFPL4Q7Z7J7 247 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 LYPD6Q86Y78 171 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 RPS20P60866 119 aaKnown RBP13.73□□□□□ -0.21
SCARB2-210ENST00000638567 RNFT1Q5M7Z0 435 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 C18orf15Q96N68 181 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 GZMBP10144 247 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 TFPI2P48307 235 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 PCP4P48539 62 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 CX3CL1P78423 397 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 ZNF502Q8TBZ5 544 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 CENPFP49454 3210 aa13.73□□□□□ -0.21
SCARB2-210ENST00000638567 IGHV3-49A0A0A0MS15 119 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms