RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 TMEM126AQ9H061 195 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
UBE3A-227ENST00000638011 F8WEM9 126 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 GFRA3O60609 400 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 GUSBP11Q6P575 273 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 UNQ5815/PRO19632Q6UWF5 114 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 VN1R4Q7Z5H5 301 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 TOMM7Q9P0U1 55 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 NRN1LQ496H8 165 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 FAM208BQ5VWN6 2430 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 TGFAP01135 160 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 REG1BP48304 166 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 DLL3Q9NYJ7 618 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 METTL12A8MUP2 240 aa12.81□□□□□ -0.36
UBE3A-227ENST00000638011 UPK3AO75631 287 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 PF4V1P10720 104 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 MPZP25189 248 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 IGHV1OR21-1A0A087WYE8 117 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 TMEM144Q7Z5S9 345 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 EAF1Q96JC9 268 aaPredicted RBP12.8□□□□□ -0.36
UBE3A-227ENST00000638011 ADAMTSL1Q8N6G6 1762 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 ZNF362Q5T0B9 420 aaPredicted RBP12.8□□□□□ -0.36
UBE3A-227ENST00000638011 SHISA7A6NL88 538 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 TM4SF4P48230 202 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 FAM166AQ6J272 317 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 ADAMTSL5Q6ZMM2 481 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 UBL5Q9BZL1 73 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 TMEM14DPA8MWL7 114 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 A8MWP6 167 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 THY1P04216 161 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 CT62P0C5K7 136 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 MRAPQ8TCY5 172 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 IFI27L2Q9H2X8 130 aa12.8□□□□□ -0.36
UBE3A-227ENST00000638011 PVRIGQ6DKI7 326 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 KIF26AQ9ULI4 1882 aaPredicted RBP12.79□□□□□ -0.36
UBE3A-227ENST00000638011 IGHV3-21A0A0B4J1V1 117 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 LOC105371242A0A075B767 164 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 PPIAL4CA0A0B4J2A2 164 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 TMEM229AB2RXF0 380 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 FGF16O43320 207 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 PPIAL4GP0DN37 164 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 SPEM2Q0P670 501 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 ZNF205O95201 554 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 TSPAN7P41732 249 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 GUSBP1Q15486 140 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 C1QAP02745 245 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 NPIPB3Q92617 1050 aa12.79□□□□□ -0.36
UBE3A-227ENST00000638011 ATXN7O15265 892 aaPredicted RBP12.78□□□□□ -0.36
UBE3A-227ENST00000638011 MS4A4AQ96JQ5 239 aa12.78□□□□□ -0.36
UBE3A-227ENST00000638011 KLK10O43240 276 aa12.78□□□□□ -0.36
UBE3A-227ENST00000638011 CD300EQ496F6 205 aaPredicted RBP12.78□□□□□ -0.36
UBE3A-227ENST00000638011 SPINK14Q6IE38 97 aa12.78□□□□□ -0.36
UBE3A-227ENST00000638011 A0A1B0GTI1 187 aa12.78□□□□□ -0.36
UBE3A-227ENST00000638011 FAM89BQ8N5H3 189 aa12.78□□□□□ -0.36
UBE3A-227ENST00000638011 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
UBE3A-227ENST00000638011 COLCA2A8K830 154 aa12.78□□□□□ -0.36
UBE3A-227ENST00000638011 C20orf144Q9BQM9 153 aa12.78□□□□□ -0.36
UBE3A-227ENST00000638011 IL18BPO95998 194 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 TFPI2P48307 235 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 GP6Q9HCN6 339 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 SOCS3O14543 225 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 TMEM171Q8WVE6 324 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 DUX3Q96PT4 197 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 FOXQ1Q9C009 403 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 RNASE7Q9H1E1 156 aaKnown RBP12.77□□□□□ -0.36
UBE3A-227ENST00000638011 DUSP15Q9H1R2 295 aaPredicted RBP12.77□□□□□ -0.36
UBE3A-227ENST00000638011 LHX9Q9NQ69 397 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 SYS1-DBNDD2H3BUS1 97 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 COL9A1P20849 921 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 PRTN3P24158 256 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 C3AR1Q16581 482 aa12.77□□□□□ -0.36
UBE3A-227ENST00000638011 IQCF6A8MYZ5 107 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 IGHG4P01861 327 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 TDGF1P3P51864 188 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 IGKV3OR2-268A0A0C4DH90 116 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 AHRRA9YTQ3 701 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 CD28P10747 220 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 FGF11Q92914 225 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 PILRBQ9UKJ0 227 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 MMP23AO75900 390 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 PATE4P0C8F1 98 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 SAA1P0DJI8 122 aaPredicted RBP12.77□□□□□ -0.37
UBE3A-227ENST00000638011 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 RPL32P62910 135 aaKnown RBP12.77□□□□□ -0.37
UBE3A-227ENST00000638011 PPP1R27Q86WC6 154 aa12.77□□□□□ -0.37
UBE3A-227ENST00000638011 PSG1P11464 419 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 HIVEP3Q5T1R4 2406 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 TRGV11A0A075B6L2 103 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 GAGE7O76087 117 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 GAGE4Q13068 117 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 CFHR5Q9BXR6 569 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 C9orf172C9J069 976 aa12.76□□□□□ -0.37
UBE3A-227ENST00000638011 FCN3O75636 299 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms