RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 INTS1Q8N201 2190 aaKnown RBP13.18□□□□□ -0.3
CLN5-218ENST00000637397 RPL13AP40429 203 aaKnown RBP13.17□□□□□ -0.3
CLN5-218ENST00000637397 CLEC7AQ9BXN2 247 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 C7orf71A4D174 169 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
CLN5-218ENST00000637397 Q0VFX4 171 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 Q6P435 159 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 PEF1Q9UBV8 284 aaKnown RBP13.17□□□□□ -0.3
CLN5-218ENST00000637397 METRNQ9UJH8 293 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 TRBV6-6A0A0A6YYG2 114 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 TRAV3A0A0B4J244 114 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 CD69Q07108 199 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 DNLZQ5SXM8 178 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 FAM90A1Q86YD7 464 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 MGST2Q99735 147 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 PAX9P55771 341 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
CLN5-218ENST00000637397 PNKDQ8N490 385 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 SPRR3Q9UBC9 169 aa13.17□□□□□ -0.3
CLN5-218ENST00000637397 TRAV5A0A0B4J249 113 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 SP9P0CG40 484 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 ANOS1P23352 680 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 OR10W1Q8NGF6 305 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 RNASEH2CQ8TDP1 164 aaKnown RBP13.16□□□□□ -0.3
CLN5-218ENST00000637397 LOXL4Q96JB6 756 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 ETV2O00321 342 aaPredicted RBP13.16□□□□□ -0.3
CLN5-218ENST00000637397 RBPMS2Q6ZRY4 209 aaKnown RBP13.16□□□□□ -0.3
CLN5-218ENST00000637397 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 FOXH1O75593 365 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 ZCCHC24Q8N2G6 241 aaKnown RBP13.16□□□□□ -0.3
CLN5-218ENST00000637397 C2orf88Q9BSF0 95 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 Q9H3A6 140 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 A1L4Q6 167 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 H3BVH4 76 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 HTN1P15515 57 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 TMEM105Q8N8V8 129 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 KLK15Q9H2R5 256 aa13.16□□□□□ -0.3
CLN5-218ENST00000637397 TRAV9-2A0A087WT02 112 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 NTF4P34130 210 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 PRCDQ00LT1 54 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 PRR31Q5SQ13 230 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 PFN1P07737 140 aaKnown RBP13.15□□□□□ -0.3
CLN5-218ENST00000637397 RABAC1Q9UI14 185 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 RALYQ9UKM9 306 aaKnown RBP13.15□□□□□ -0.3
CLN5-218ENST00000637397 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 SS18L1O75177 396 aaPredicted RBP13.15□□□□□ -0.3
CLN5-218ENST00000637397 PRELID3AQ96N28 172 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 LINC00312Q9Y6C7 94 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 CREBBPQ92793 2442 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 IGHV3OR16-13A0A075B7E8 117 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 IGHV3-74A0A0B4J1X5 117 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 OR10J3Q5JRS4 329 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 NIT1Q86X76 327 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 WFDC3Q8IUB2 231 aa13.15□□□□□ -0.3
CLN5-218ENST00000637397 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 A0A1B0GUS0 222 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 C15orf62A8K5M9 175 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 PRB3Q04118 309 aaPredicted RBP13.14□□□□□ -0.31
CLN5-218ENST00000637397 UNQ5815/PRO19632Q6UWF5 114 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 HIST1H4GQ99525 98 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 EPDR1Q9UM22 224 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 RNF115Q9Y4L5 304 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 LOC107984156A0A0G2JMH3 177 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 CCL21O00585 134 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 ARL17AQ8IVW1 177 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 ALKBH7Q9BT30 221 aaPredicted RBP13.14□□□□□ -0.31
CLN5-218ENST00000637397 RPS20P60866 119 aaKnown RBP13.14□□□□□ -0.31
CLN5-218ENST00000637397 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 C16orf92Q96LL3 132 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 FAM90A9PA6NNJ1 464 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 DLX1P56177 255 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 PSG9Q00887 426 aa13.14□□□□□ -0.31
CLN5-218ENST00000637397 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
CLN5-218ENST00000637397 A8MWP6 167 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 TM4SF20Q53R12 229 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 TEX45Q8NA69 505 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 EREGO14944 169 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 CX3CL1P78423 397 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 COQ2Q96H96 371 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 SOX21Q9Y651 276 aaPredicted RBP13.13□□□□□ -0.31
CLN5-218ENST00000637397 FOXI3A8MTJ6 420 aaPredicted RBP13.13□□□□□ -0.31
CLN5-218ENST00000637397 LHFPL4Q7Z7J7 247 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 CYYR1Q96J86 154 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 SRRM5B3KS81 715 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 DLEU1O43261 78 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 C10orf55Q5SWW7 151 aa13.13□□□□□ -0.31
CLN5-218ENST00000637397 IGHV1-18A0A0C4DH31 117 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 MYOD1P15172 320 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 ZNF726P1Q15940 193 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 UBTD1Q9HAC8 227 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 C9JCJ5 164 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 NPIPB11E5RHQ5 1161 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 GFRA3O60609 400 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 ZNF883P0CG24 379 aa13.12□□□□□ -0.31
CLN5-218ENST00000637397 MEF2CQ06413 473 aaPredicted RBP13.12□□□□□ -0.31
CLN5-218ENST00000637397 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms