RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 PRR13Q9NZ81 148 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 CACFD1Q9UGQ2 172 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 SMPXQ9UHP9 88 aa10.33□□□□□ -0.76
PNKP-228ENST00000637325 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
PNKP-228ENST00000637325 IGHV3-49A0A0A0MS15 119 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 RPS10-NUDT3A0A1W2PQS6 291 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 ZNF701M0R085 212 aaPredicted RBP10.32□□□□□ -0.76
PNKP-228ENST00000637325 CHEK1O14757 476 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 NXPH3O95157 252 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 TMEM50AO95807 157 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 LYL1P12980 280 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 BMI1P35226 326 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 INPP1P49441 399 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 SRPXP78539 464 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 AARDQ4LEZ3 155 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 SPANXN2Q5MJ10 180 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 ZNF600Q6ZNG1 722 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 LGI3Q8N145 548 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 TRIM63Q969Q1 353 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 OR10C1Q96KK4 312 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 GGTLC1Q9BX51 225 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 RBM38Q9H0Z9 239 aaKnown RBP10.32□□□□□ -0.76
PNKP-228ENST00000637325 HIPK2Q9H2X6 1198 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 RETNQ9HD89 108 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 UBQLN2Q9UHD9 624 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 V9GYH0 126 aa10.32□□□□□ -0.76
PNKP-228ENST00000637325 A0A0B4J2A0 478 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 PIGBOS1A0A0B4J2F0 54 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 OR4C46A6NHA9 309 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 CLN5O75503 358 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 ZNF79Q15937 498 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 MLANAQ16655 118 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 PVRIGQ6DKI7 326 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 TOMM20LQ6UXN7 152 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 CCDC190Q86UF4 302 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 RNF2Q99496 336 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 FAM110AQ9BQ89 295 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 SHPKQ9UHJ6 478 aa10.31□□□□□ -0.76
PNKP-228ENST00000637325 PUS1Q9Y606 427 aaKnown RBP eCLIP10.31□□□□□ -0.76
PNKP-228ENST00000637325 KMT2CQ8NEZ4 4911 aaKnown RBP10.3□□□□□ -0.76
PNKP-228ENST00000637325 IGKV3-7A0A075B6H7 116 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 CCR6P51684 374 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 SUPT4H1P63272 117 aaKnown RBP10.3□□□□□ -0.76
PNKP-228ENST00000637325 SMCO1Q147U7 214 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 BSXQ3C1V8 233 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 NOXA1Q86UR1 476 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 SLC24A4Q8NFF2 622 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 OR4X1Q8NH49 305 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 DEDD2Q8WXF8 326 aa10.3□□□□□ -0.76
PNKP-228ENST00000637325 SLC25A21Q9BQT8 299 aaPredicted RBP10.3□□□□□ -0.76
PNKP-228ENST00000637325 FNDC4Q9H6D8 234 aaPredicted RBP10.3□□□□□ -0.76
PNKP-228ENST00000637325 TRAV30A0A087WSZ9 112 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 VAMP1P23763 118 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 TFPI2P48307 235 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
PNKP-228ENST00000637325 PAFAH1B2P68402 229 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 C2orf83Q53S99 150 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 TMEM128Q5BJH2 165 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 TRIQKQ629K1 86 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 ETFRF1Q6IPR1 90 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 OR1S1Q8NH92 325 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 RNASEH2CQ8TDP1 164 aaKnown RBP10.29□□□□□ -0.76
PNKP-228ENST00000637325 ZNF414Q96IQ9 312 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 TMEM231Q9H6L2 316 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 EDA2RQ9HAV5 297 aa10.29□□□□□ -0.76
PNKP-228ENST00000637325 MRPL36Q9P0J6 103 aaKnown RBP10.29□□□□□ -0.76
PNKP-228ENST00000637325 IFNA10P01566 189 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 CD5P06127 495 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 SLC25A4P12235 298 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 NPPCP23582 126 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 NPY1RP25929 384 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 RPL11P62913 178 aaKnown RBP10.28□□□□□ -0.76
PNKP-228ENST00000637325 TNFRSF9Q07011 255 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 TIGITQ495A1 244 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 NMSQ5H8A3 153 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 TCF24Q7RTU0 167 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 GBGT1Q8N5D6 347 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 ST8SIA2Q92186 375 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 NARS2Q96I59 477 aaKnown RBP10.28□□□□□ -0.76
PNKP-228ENST00000637325 METTL26Q96S19 204 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 AGRNO00468 2067 aa10.28□□□□□ -0.76
PNKP-228ENST00000637325 IGHV3-66A0A0C4DH42 116 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 A0A1B0GU03 582 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 DUXBA0A1W2PPF3 345 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 A0A1W2PS18 150 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 DNASE2O00115 360 aaPredicted RBP10.27□□□□□ -0.77
PNKP-228ENST00000637325 RND2P52198 227 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 APOC4P55056 127 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 ODF3L2Q3SX64 289 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 OR1S2Q8NGQ3 325 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 DTD1Q8TEA8 209 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 SRRQ9GZT4 340 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 RBKSQ9H477 322 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms