RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PVALBP20472 110 aaPredicted RBP12.32□□□□□ -0.44
CLN6-216ENST00000636876 MFAP4P55083 255 aa12.32□□□□□ -0.44
CLN6-216ENST00000636876 MLANAQ16655 118 aa12.32□□□□□ -0.44
CLN6-216ENST00000636876 PPP1R1CQ8WVI7 109 aa12.32□□□□□ -0.44
CLN6-216ENST00000636876 F8W735 103 aaPredicted RBP12.31□□□□□ -0.44
CLN6-216ENST00000636876 BMPR1BO00238 502 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 DEDDO75618 318 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 RLN2P04090 185 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 CLEC3BP05452 202 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 FCGR2BP31994 310 aaPredicted RBP12.31□□□□□ -0.44
CLN6-216ENST00000636876 GPR183P32249 361 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 LRRC37A5PQ49AS3 106 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 ACSM6Q6P461 480 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 TMEM14EPQ6UXP3 125 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 TXN2Q99757 166 aa12.31□□□□□ -0.44
CLN6-216ENST00000636876 ZNF436Q9C0F3 470 aaPredicted RBP12.31□□□□□ -0.44
CLN6-216ENST00000636876 OR2T8A6NH00 312 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 MPC2O95563 127 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 GIPP09681 153 aaPredicted RBP12.3□□□□□ -0.44
CLN6-216ENST00000636876 SLC25A4P12235 298 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 ZP3P21754 424 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 ARL3P36405 182 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 GPX4P36969 197 aaPredicted RBP12.3□□□□□ -0.44
CLN6-216ENST00000636876 NPBWR1P48145 328 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 CD69Q07108 199 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 Q56UQ5 140 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 LINC00482Q8N8I6 264 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 UBAC2Q8NBM4 344 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 ASB13Q8WXK3 278 aa12.3□□□□□ -0.44
CLN6-216ENST00000636876 BSCL2Q96G97 398 aaPredicted RBP12.3□□□□□ -0.44
CLN6-216ENST00000636876 GAR1Q9NY12 217 aaKnown RBP12.3□□□□□ -0.44
CLN6-216ENST00000636876 MRPL36Q9P0J6 103 aaKnown RBP12.3□□□□□ -0.44
CLN6-216ENST00000636876 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 H0YIZ8 118 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 TGOLN2O43493 480 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 WIPF1O43516 503 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 GGCTO75223 188 aaKnown RBP12.29□□□□□ -0.44
CLN6-216ENST00000636876 METTL15P1P0C7V9 234 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 HOXD3P31249 432 aaPredicted RBP12.29□□□□□ -0.44
CLN6-216ENST00000636876 BCAP31P51572 246 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 SLURP1P55000 103 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 PRR31Q5SQ13 230 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 PRSS54Q6PEW0 395 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 SLC16A13Q7RTY0 426 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 OR4X1Q8NH49 305 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 OR5AC2Q9NZP5 309 aa12.29□□□□□ -0.44
CLN6-216ENST00000636876 NOTCH3Q9UM47 2321 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 E5RGE8 158 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 GNG7O60262 68 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 CCNKO75909 580 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 PET100P0DJ07 73 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 CAV2P51636 162 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 RND2P52198 227 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 RAP2BP61225 183 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 RPEL1Q2QD12 228 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 OR8G2PQ6IF36 304 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 TMEM116Q8NCL8 245 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 CHRDL1Q9BU40 450 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 RNF126Q9BV68 326 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
CLN6-216ENST00000636876 LYRM2Q9NU23 88 aaPredicted RBP12.28□□□□□ -0.44
CLN6-216ENST00000636876 FAM24AA6NFZ4 105 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 CLN5O75503 358 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 OR2C1O95371 312 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 CTSGP08311 255 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 ADMP35318 185 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 KLF5Q13887 457 aaPredicted RBP12.27□□□□□ -0.45
CLN6-216ENST00000636876 DCUN1D4Q92564 292 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 DLX4Q92988 240 aaPredicted RBP12.27□□□□□ -0.45
CLN6-216ENST00000636876 ACY3Q96HD9 319 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 SLC35E1Q96K37 410 aa12.27□□□□□ -0.45
CLN6-216ENST00000636876 IGSF23A1L1A6 192 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 NUPL2O15504 423 aaKnown RBP12.26□□□□□ -0.45
CLN6-216ENST00000636876 P2RY1P47900 373 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 ARL16Q0P5N6 197 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 GAMTQ14353 236 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 ACOT7LQ6ZUV0 252 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 HAPLN4Q86UW8 402 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 TMEM252Q8N6L7 170 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 WFDC9Q8NEX5 89 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 OR10P1Q8NGE3 313 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 CHAC2Q8WUX2 184 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 NPIPB3Q92617 1050 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 MBD2Q9UBB5 411 aa12.26□□□□□ -0.45
CLN6-216ENST00000636876 TRAV14DV4A0A0A6YYC5 116 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 CST7O76096 145 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 SCAF4O95104 1147 aaKnown RBP12.25□□□□□ -0.45
CLN6-216ENST00000636876 LYL1P12980 280 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 CD33P20138 364 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 SYNJ2BPP57105 145 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 DLK1P80370 383 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 TREML4Q6UXN2 200 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 GPHB5Q86YW7 130 aa12.25□□□□□ -0.45
CLN6-216ENST00000636876 TRAV30A0A087WSZ9 112 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 IGHV3-35A0A0C4DH35 117 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms