RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 IL22RA2Q969J5 263 aa13.74□□□□□ -0.21
CLN6-214ENST00000636314 TMEM230Q96A57 120 aa13.74□□□□□ -0.21
CLN6-214ENST00000636314 GALNT14Q96FL9 552 aa13.74□□□□□ -0.21
CLN6-214ENST00000636314 TMEM56-RWDD3S4R434 201 aa13.74□□□□□ -0.21
CLN6-214ENST00000636314 ALMS1Q8TCU4 4167 aa13.74□□□□□ -0.21
CLN6-214ENST00000636314 AKR1C4P17516 323 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 OPRK1P41145 380 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 KLF9Q13886 244 aaPredicted RBP13.73□□□□□ -0.21
CLN6-214ENST00000636314 PVRIGQ6DKI7 326 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 TOMM5Q8N4H5 51 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 ZNF414Q96IQ9 312 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 OR10C1Q96KK4 312 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 HIPK2Q9H2X6 1198 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 RETNQ9HD89 108 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
CLN6-214ENST00000636314 PLECQ15149 4684 aaKnown RBP13.73□□□□□ -0.21
CLN6-214ENST00000636314 IGHV7-4-1A0A0J9YVY3 117 aa13.72□□□□□ -0.21
CLN6-214ENST00000636314 ZNF701M0R085 212 aaPredicted RBP13.72□□□□□ -0.21
CLN6-214ENST00000636314 ANXA3P12429 323 aa13.72□□□□□ -0.21
CLN6-214ENST00000636314 TMEM187Q14656 261 aa13.72□□□□□ -0.21
CLN6-214ENST00000636314 ZNF79Q15937 498 aa13.72□□□□□ -0.21
CLN6-214ENST00000636314 TMEM116Q8NCL8 245 aa13.72□□□□□ -0.21
CLN6-214ENST00000636314 GINS3Q9BRX5 216 aa13.72□□□□□ -0.21
CLN6-214ENST00000636314 HEYLQ9NQ87 328 aaPredicted RBP13.72□□□□□ -0.21
CLN6-214ENST00000636314 SMPXQ9UHP9 88 aa13.72□□□□□ -0.21
CLN6-214ENST00000636314 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 OR4C46A6NHA9 309 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 CEBPZOSA8MTT3 80 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 SCGB2A1O75556 95 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 HTR2BP41595 481 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 BSXQ3C1V8 233 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 ZNF600Q6ZNG1 722 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 FAM110AQ9BQ89 295 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 RHPN1-AS1Q9BWJ2 59 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 GGTLC1Q9BX51 225 aa13.71□□□□□ -0.21
CLN6-214ENST00000636314 TRAV14DV4A0A0A6YYC5 116 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 CHEK1O14757 476 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 NXPH3O95157 252 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 BMI1P35226 326 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 SUPT4H1P63272 117 aaKnown RBP13.7□□□□□ -0.22
CLN6-214ENST00000636314 SRPXP78539 464 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 CCDC190Q86UF4 302 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 SLC24A4Q8NFF2 622 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 RNF2Q99496 336 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
CLN6-214ENST00000636314 CACFD1Q9UGQ2 172 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 UBQLN2Q9UHD9 624 aa13.7□□□□□ -0.22
CLN6-214ENST00000636314 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
CLN6-214ENST00000636314 A0A0B4J2A0 478 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 RPS10-NUDT3A0A1W2PQS6 291 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 TMEM50AO95807 157 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 LGI3Q8N145 548 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 DEDD2Q8WXF8 326 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 SHPKQ9UHJ6 478 aa13.69□□□□□ -0.22
CLN6-214ENST00000636314 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLN6-214ENST00000636314 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 CLN5O75503 358 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 CCR6P51684 374 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 C2orf83Q53S99 150 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 IL17DQ8TAD2 202 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
CLN6-214ENST00000636314 MRPL36Q9P0J6 103 aaKnown RBP13.68□□□□□ -0.22
CLN6-214ENST00000636314 PIGBOS1A0A0B4J2F0 54 aa13.67□□□□□ -0.22
CLN6-214ENST00000636314 SMCO1Q147U7 214 aa13.67□□□□□ -0.22
CLN6-214ENST00000636314 ODF3L2Q3SX64 289 aa13.67□□□□□ -0.22
CLN6-214ENST00000636314 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
CLN6-214ENST00000636314 LYZL2Q7Z4W2 148 aa13.67□□□□□ -0.22
CLN6-214ENST00000636314 RNASEH2CQ8TDP1 164 aaKnown RBP13.67□□□□□ -0.22
CLN6-214ENST00000636314 IGKV3-7A0A075B6H7 116 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 A0A1B0GU03 582 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 VAMP1P23763 118 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 NPY1RP25929 384 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 TFPI2P48307 235 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 INPP1P49441 399 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 TNFRSF9Q07011 255 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 MLANAQ16655 118 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 TMEM128Q5BJH2 165 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
CLN6-214ENST00000636314 SRRQ9GZT4 340 aa13.66□□□□□ -0.22
CLN6-214ENST00000636314 TRAV30A0A087WSZ9 112 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 CD5P06127 495 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 SLC25A4P12235 298 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 APOC4P55056 127 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 TCF24Q7RTU0 167 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 NOXA1Q86UR1 476 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 DTD1Q8TEA8 209 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 ST8SIA2Q92186 375 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 TMEM231Q9H6L2 316 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 HSPB7Q9UBY9 170 aa13.65□□□□□ -0.22
CLN6-214ENST00000636314 IGHV3-66A0A0C4DH42 116 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 IFNA10P01566 189 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms