RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 TMEM213A2RRL7 107 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 F8W735 103 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-209ENST00000635450 LYRM1O43325 122 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 TNFRSF9Q07011 255 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 TM4SF20Q53R12 229 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 UNQ9165/PRO28630Q6UXU0 137 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 GTSCR1Q86UQ5 136 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 NOXA1Q86UR1 476 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 SLC24A4Q8NFF2 622 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 TMEM190Q8WZ59 177 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 C20orf24Q9BUV8 137 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 MRPL27Q9P0M9 148 aaKnown RBP11.76□□□□□ -0.53
LINC00339-209ENST00000635450 FLVCR2Q9UPI3 526 aa11.76□□□□□ -0.53
LINC00339-209ENST00000635450 RPS10-NUDT3A0A1W2PQS6 291 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 C9orf170A2RU37 121 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 SCGB2A1O75556 95 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 CTSGP08311 255 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 HOXB5P09067 269 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 BTCP35070 178 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 ADMP35318 185 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 CD300EQ496F6 205 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-209ENST00000635450 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 C2orf83Q53S99 150 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 PVRIGQ6DKI7 326 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 UXS1Q8NBZ7 420 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 COQ8AQ8NI60 647 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 C19orf73Q9NVV2 129 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 HSPB7Q9UBY9 170 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 SELENOKQ9Y6D0 94 aa11.75□□□□□ -0.53
LINC00339-209ENST00000635450 PLA2G10O15496 165 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 IFNA10P01566 189 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 OR4E1P0C645 316 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 SLC25A6P12236 298 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 NPY1RP25929 384 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 RNASEH2CQ8TDP1 164 aaKnown RBP11.74□□□□□ -0.53
LINC00339-209ENST00000635450 DTD1Q8TEA8 209 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 TM2D3Q9BRN9 247 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 WDR12Q9GZL7 423 aaKnown RBP11.74□□□□□ -0.53
LINC00339-209ENST00000635450 RBKSQ9H477 322 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 DAZ1Q9NQZ3 744 aaKnown RBP11.74□□□□□ -0.53
LINC00339-209ENST00000635450 U3KQ87 197 aa11.74□□□□□ -0.53
LINC00339-209ENST00000635450 MED6O75586 246 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 YIF1AO95070 293 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 ANXA7P20073 488 aaKnown RBP11.73□□□□□ -0.53
LINC00339-209ENST00000635450 DHRS2Q13268 280 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 ZNF846Q147U1 533 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 GUCA2BQ16661 112 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 LYG2Q86SG7 212 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 MUC7Q8TAX7 377 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 C20orf85Q9H1P6 137 aa11.73□□□□□ -0.53
LINC00339-209ENST00000635450 C15orf62A8K5M9 175 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 FAM90A26D6RGX4 464 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 K7EMT4 169 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 PITX3O75364 302 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 TMEM50AO95807 157 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 IFNA21P01568 189 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 C8orf88P0DMB2 117 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 CASC10Q5T4H9 136 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 GGNBP1Q5YKI7 109 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 RBPMS2Q6ZRY4 209 aaKnown RBP11.72□□□□□ -0.53
LINC00339-209ENST00000635450 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 FNDC4Q9H6D8 234 aaPredicted RBP11.72□□□□□ -0.53
LINC00339-209ENST00000635450 MLXQ9UH92 298 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 RYR2Q92736 4967 aa11.72□□□□□ -0.53
LINC00339-209ENST00000635450 LYSTQ99698 3801 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 IGHV3OR16-8A0A075B7F1 116 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 TRAV30A0A087WSZ9 112 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 FAM240BA0A1B0GVZ2 78 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 A8MZ25 164 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 C3orf84H3BNL1 204 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 CLN5O75503 358 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 TCRBP04435 133 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 SLC25A4P12235 298 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.53
LINC00339-209ENST00000635450 CD81P60033 236 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 ZNF600Q6ZNG1 722 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 OR4X1Q8NH49 305 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 GINS3Q9BRX5 216 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 RETNQ9HD89 108 aa11.71□□□□□ -0.53
LINC00339-209ENST00000635450 TRAV6A0A075B6T7 132 aa11.7□□□□□ -0.54
LINC00339-209ENST00000635450 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
LINC00339-209ENST00000635450 ZNF785A8K8V0 405 aa11.7□□□□□ -0.54
LINC00339-209ENST00000635450 ZNF207O43670 478 aaKnown RBP11.7□□□□□ -0.54
LINC00339-209ENST00000635450 IFNA4P05014 189 aa11.7□□□□□ -0.54
LINC00339-209ENST00000635450 MLANAQ16655 118 aa11.7□□□□□ -0.54
LINC00339-209ENST00000635450 TMEM61Q8N0U2 210 aa11.7□□□□□ -0.54
LINC00339-209ENST00000635450 WDR89Q96FK6 387 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-209ENST00000635450 CIB3Q96Q77 187 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-209ENST00000635450 TRAV14DV4A0A0A6YYC5 116 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 ADAP1O75689 374 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
LINC00339-209ENST00000635450 IAPPP10997 89 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 RAB11AP62491 216 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms