RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ABHD5Q8WTS1 349 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 P2RX4Q99571 388 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 HSPB9Q9BQS6 159 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 PRSS22Q9GZN4 317 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 TIMM9Q9Y5J7 89 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 OR51B2Q9Y5P1 312 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 C15orf61A6NNL5 157 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 LY86O95711 162 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 IFNA5P01569 189 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 IFNA17P01571 189 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 TAGLN2P37802 199 aaKnown RBP11.42□□□□□ -0.58
LINC00339-208ENST00000634934 FXYD3Q14802 87 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 ZNF562Q6V9R5 426 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 Q6ZS46 218 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 TAF15Q92804 592 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC00339-208ENST00000634934 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
LINC00339-208ENST00000634934 QTRT1Q9BXR0 403 aaKnown RBP11.42□□□□□ -0.58
LINC00339-208ENST00000634934 COMMD5Q9GZQ3 224 aa11.42□□□□□ -0.58
LINC00339-208ENST00000634934 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.42□□□□□ -0.58
LINC00339-208ENST00000634934 IGHV7-81A0A0B4J1V7 117 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 M0R036 132 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 NXPH3O95157 252 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 S100A6P06703 90 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 RPL35P42766 123 aaKnown RBP11.41□□□□□ -0.58
LINC00339-208ENST00000634934 AKR1D1P51857 326 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 ICAM4Q14773 271 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 MDFIQ99750 246 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 HINT2Q9BX68 163 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 FKBP11Q9NYL4 201 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 FBXO7Q9Y3I1 522 aa11.41□□□□□ -0.58
LINC00339-208ENST00000634934 TEX50A0A1B0GTY4 177 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 LINC01548A6NM66 108 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 RPL27AP46776 148 aaKnown RBP11.4□□□□□ -0.58
LINC00339-208ENST00000634934 COMPP49747 757 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-208ENST00000634934 RPL15P61313 204 aaKnown RBP11.4□□□□□ -0.58
LINC00339-208ENST00000634934 HBG1P69891 147 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 HBG2P69892 147 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 SSBP2P81877 361 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-208ENST00000634934 NDPQ00604 133 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 KRTAP24-1Q3LI83 254 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 FAM103A1Q9BTL3 118 aaKnown RBP11.4□□□□□ -0.58
LINC00339-208ENST00000634934 ZNF702PQ9H963 129 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-208ENST00000634934 COL6A5A8TX70 2615 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 TNCP24821 2201 aa11.4□□□□□ -0.58
LINC00339-208ENST00000634934 LOC102723971A0A1B0GUV8 181 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 AP4M1O00189 453 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 SYNGR2O43760 224 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 SOX15O60248 233 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 EIF3GO75821 320 aaKnown RBP eCLIP11.4□□□□□ -0.59
LINC00339-208ENST00000634934 S100A9P06702 114 aaKnown RBP11.4□□□□□ -0.59
LINC00339-208ENST00000634934 SPINK9Q5DT21 86 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 DNLZQ5SXM8 178 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 Q6ZSV7 163 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 OR1L8Q8NGR8 309 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 SRSF12Q8WXF0 261 aaKnown RBP11.4□□□□□ -0.59
LINC00339-208ENST00000634934 TVP23CQ96ET8 276 aa11.4□□□□□ -0.59
LINC00339-208ENST00000634934 PLXNB1O43157 2135 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 H3BQ15 152 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 ATP6V0E1O15342 81 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 IGHG2P01859 326 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 APELAP0DMC3 54 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 HSPE1P61604 102 aaKnown RBP11.39□□□□□ -0.59
LINC00339-208ENST00000634934 SNRPEP62304 92 aaKnown RBP11.39□□□□□ -0.59
LINC00339-208ENST00000634934 ATP6V1FQ16864 119 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 TMEM95Q3KNT9 176 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 KRTAP21-3Q3LHN1 58 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 OR5B3Q8NH48 314 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 NIPSNAP3BQ9BS92 247 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 LINC00527Q9UJ94 153 aa11.39□□□□□ -0.59
LINC00339-208ENST00000634934 E7EUB6 86 aa11.38□□□□□ -0.59
LINC00339-208ENST00000634934 OR2C1O95371 312 aa11.38□□□□□ -0.59
LINC00339-208ENST00000634934 RND2P52198 227 aa11.38□□□□□ -0.59
LINC00339-208ENST00000634934 ETV3LQ6ZN32 361 aa11.38□□□□□ -0.59
LINC00339-208ENST00000634934 OR2T6Q8NHC8 308 aa11.38□□□□□ -0.59
LINC00339-208ENST00000634934 ZNF257Q9Y2Q1 563 aa11.38□□□□□ -0.59
LINC00339-208ENST00000634934 CEBPZOSA8MTT3 80 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 CST7O76096 145 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-208ENST00000634934 SPCS3P61009 180 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 CCL20P78556 96 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 ECSCRQ19T08 205 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 TMEM14EPQ6UXP3 125 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 Q8N2B8 174 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-208ENST00000634934 SCGB1C1Q8TD33 95 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 C2CD4CQ8TF44 421 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 NOL4LQ96MY1 436 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-208ENST00000634934 RARRES2Q99969 163 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 MAGT1Q9H0U3 335 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 TMPRSS5Q9H3S3 457 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
LINC00339-208ENST00000634934 CGB1A6NKQ9 187 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 IFNA1P01562 189 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 OR13C7P0DN81 318 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms