RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 SPNP16150 400 aa15.49■□□□□ 0.07
PTCD3-220ENST00000627371 CHRDL1Q9BU40 450 aa15.49■□□□□ 0.07
PTCD3-220ENST00000627371 PEMTQ9UBM1 199 aa15.49■□□□□ 0.07
PTCD3-220ENST00000627371 MEGF8Q7Z7M0 2845 aa15.49■□□□□ 0.07
PTCD3-220ENST00000627371 RPS10-NUDT3A0A1W2PQS6 291 aa15.48■□□□□ 0.07
PTCD3-220ENST00000627371 LY86O95711 162 aa15.48■□□□□ 0.07
PTCD3-220ENST00000627371 ADMP35318 185 aa15.48■□□□□ 0.07
PTCD3-220ENST00000627371 NPBWR1P48145 328 aa15.48■□□□□ 0.07
PTCD3-220ENST00000627371 FAM106AQ4KMX7 169 aa15.48■□□□□ 0.07
PTCD3-220ENST00000627371 IL34Q6ZMJ4 242 aa15.48■□□□□ 0.07
PTCD3-220ENST00000627371 OR4C12Q96R67 309 aa15.48■□□□□ 0.07
PTCD3-220ENST00000627371 ZNF436Q9C0F3 470 aaPredicted RBP15.48■□□□□ 0.07
PTCD3-220ENST00000627371 SORL1Q92673 2214 aa15.47■□□□□ 0.07
PTCD3-220ENST00000627371 FAM25EA8MYX2 175 aa15.47■□□□□ 0.07
PTCD3-220ENST00000627371 WRBO00258 174 aa15.47■□□□□ 0.07
PTCD3-220ENST00000627371 NUPL2O15504 423 aaKnown RBP15.47■□□□□ 0.07
PTCD3-220ENST00000627371 GNG7O60262 68 aa15.47■□□□□ 0.07
PTCD3-220ENST00000627371 CTSGP08311 255 aa15.47■□□□□ 0.07
PTCD3-220ENST00000627371 POLR2GP62487 172 aaKnown RBP eCLIP15.47■□□□□ 0.07
PTCD3-220ENST00000627371 SIGLEC8Q9NYZ4 499 aa15.47■□□□□ 0.07
PTCD3-220ENST00000627371 GSKIPQ9P0R6 139 aa15.47■□□□□ 0.07
PTCD3-220ENST00000627371 IGHV3-35A0A0C4DH35 117 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 C5orf51A6NDU8 294 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 C15orf62A8K5M9 175 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 A8MWP6 167 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 SCGB1D2O95969 90 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 CSN3P07498 182 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 KRTAP10-11P60412 298 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 RPP30P78346 268 aaKnown RBP15.46■□□□□ 0.07
PTCD3-220ENST00000627371 DEFA6Q01524 100 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 MLANAQ16655 118 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 ETFRF1Q6IPR1 90 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 OR4X1Q8NH49 305 aa15.46■□□□□ 0.07
PTCD3-220ENST00000627371 MRPL36Q9P0J6 103 aaKnown RBP15.46■□□□□ 0.07
PTCD3-220ENST00000627371 ZMAT5Q9UDW3 170 aaKnown RBP15.46■□□□□ 0.07
PTCD3-220ENST00000627371 SSSCA1O60232 199 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 CLN5O75503 358 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 IFNA4P05014 189 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 SLC25A4P12235 298 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 RAB11AP62491 216 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 RELQ04864 619 aaPredicted RBP15.45■□□□□ 0.06
PTCD3-220ENST00000627371 DCTN2Q13561 401 aaKnown RBP15.45■□□□□ 0.06
PTCD3-220ENST00000627371 UNQ9165/PRO28630Q6UXU0 137 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 GSG1LQ6UXU4 331 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 TMEM190Q8WZ59 177 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 C2orf50Q96LR7 162 aa15.45■□□□□ 0.06
PTCD3-220ENST00000627371 ZNF320A2RRD8 509 aa15.44■□□□□ 0.06
PTCD3-220ENST00000627371 C2orf70A6NJV1 201 aa15.44■□□□□ 0.06
PTCD3-220ENST00000627371 NDUFA4O00483 81 aa15.44■□□□□ 0.06
PTCD3-220ENST00000627371 CD69Q07108 199 aa15.44■□□□□ 0.06
PTCD3-220ENST00000627371 PRSS54Q6PEW0 395 aa15.44■□□□□ 0.06
PTCD3-220ENST00000627371 ZNF414Q96IQ9 312 aa15.44■□□□□ 0.06
PTCD3-220ENST00000627371 RCL1Q9Y2P8 373 aaKnown RBP15.44■□□□□ 0.06
PTCD3-220ENST00000627371 TMEM213A2RRL7 107 aa15.43■□□□□ 0.06
PTCD3-220ENST00000627371 TMEM50AO95807 157 aa15.43■□□□□ 0.06
PTCD3-220ENST00000627371 IGLV1-51P01701 117 aa15.43■□□□□ 0.06
PTCD3-220ENST00000627371 MBPP02686 304 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-220ENST00000627371 SPANXN5Q5MJ07 72 aa15.43■□□□□ 0.06
PTCD3-220ENST00000627371 SLC16A13Q7RTY0 426 aa15.43■□□□□ 0.06
PTCD3-220ENST00000627371 TMEM116Q8NCL8 245 aa15.43■□□□□ 0.06
PTCD3-220ENST00000627371 AURKAIP1Q9NWT8 199 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-220ENST00000627371 UFC1Q9Y3C8 167 aa15.43■□□□□ 0.06
PTCD3-220ENST00000627371 C7orf66A4D0T2 115 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 H3BP45 60 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 SCGB2A1O75556 95 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 RND2P52198 227 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 ELLP55199 621 aaPredicted RBP15.42■□□□□ 0.06
PTCD3-220ENST00000627371 ADAMTSL5Q6ZMM2 481 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 SMIM8Q96KF7 97 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 RAB40CQ96S21 281 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 PSENENQ9NZ42 101 aa15.42■□□□□ 0.06
PTCD3-220ENST00000627371 PAIP2BQ9ULR5 123 aaKnown RBP15.42■□□□□ 0.06
PTCD3-220ENST00000627371 STRAPQ9Y3F4 350 aaKnown RBP15.42■□□□□ 0.06
PTCD3-220ENST00000627371 TRAV30A0A087WSZ9 112 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 GOSR2O14653 212 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 PRB2P02812 416 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-220ENST00000627371 FOLR2P14207 255 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 EDN2P20800 178 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 GPX4P36969 197 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-220ENST00000627371 PAX9P55771 341 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 TAS2R30P59541 319 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 IL15RAQ13261 267 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 HAPLN4Q86UW8 402 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 CACNG8Q8WXS5 425 aa15.41■□□□□ 0.06
PTCD3-220ENST00000627371 PRSS46E5RG02 174 aa15.4■□□□□ 0.06
PTCD3-220ENST00000627371 K7EPK0 472 aa15.4■□□□□ 0.06
PTCD3-220ENST00000627371 CBLN1P23435 193 aa15.4■□□□□ 0.06
PTCD3-220ENST00000627371 RGS21Q2M5E4 152 aa15.4■□□□□ 0.06
PTCD3-220ENST00000627371 TM4SF20Q53R12 229 aa15.4■□□□□ 0.06
PTCD3-220ENST00000627371 ZNF600Q6ZNG1 722 aa15.4■□□□□ 0.06
PTCD3-220ENST00000627371 DAZ1Q9NQZ3 744 aaKnown RBP15.4■□□□□ 0.06
PTCD3-220ENST00000627371 SSNA1O43805 119 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 TSC22D2O75157 780 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 IGKV1-17P01599 117 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 IGLC1P0CG04 106 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 OR1S2Q8NGQ3 325 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 NPIPB3Q92617 1050 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 MARC2Q969Z3 335 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 ACY3Q96HD9 319 aa15.39■□□□□ 0.05
PTCD3-220ENST00000627371 SLC35E1Q96K37 410 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms