RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SLC35E4Q6ICL7 350 aa12.45□□□□□ -0.42
PMS1-221ENST00000624204 TET2Q6N021 2002 aaPredicted RBP12.45□□□□□ -0.42
PMS1-221ENST00000624204 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 HTR1DP28221 377 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 KLF5Q13887 457 aaPredicted RBP12.44□□□□□ -0.42
PMS1-221ENST00000624204 BPIFA4PQ86YQ2 179 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 MAP1LC3CQ9BXW4 147 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 SLC25A10Q9UBX3 287 aaPredicted RBP12.44□□□□□ -0.42
PMS1-221ENST00000624204 AMMECR1Q9Y4X0 333 aaPredicted RBP12.44□□□□□ -0.42
PMS1-221ENST00000624204 DMXL2Q8TDJ6 3036 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 H3BUT2 72 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 PYYP10082 97 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 MDP1Q86V88 176 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 OR1N2Q8NGR9 330 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 SLC25A40Q8TBP6 338 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 ATMQ13315 3056 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 SMG1Q96Q15 3661 aaKnown RBP12.44□□□□□ -0.42
PMS1-221ENST00000624204 LOC102723996A0A087X1L8 192 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 IGHV3-21A0A0B4J1V1 117 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 PAX2Q02962 417 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 GTF2H5Q6ZYL4 71 aa12.44□□□□□ -0.42
PMS1-221ENST00000624204 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 IGHV3OR15-7A0A075B7D8 119 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 CD46P15529 392 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 GRAMD2BQ96HH9 432 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 SCRT2Q9NQ03 307 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 A0A1W2PRD5 423 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 A0A1W2PRF3 423 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 A0A1W2PRM7 423 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 C21orf140B9A014 251 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 FAM120AOSQ5T036 256 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 WFDC3Q8IUB2 231 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 OR4S2Q8NH73 311 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 WIPF2Q8TF74 440 aaPredicted RBP12.43□□□□□ -0.42
PMS1-221ENST00000624204 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 ARF6P62330 175 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 PLGLB1Q02325 96 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 UTF1Q5T230 341 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
PMS1-221ENST00000624204 VWC2LB2RUY7 222 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 KLF7O75840 302 aaPredicted RBP12.42□□□□□ -0.42
PMS1-221ENST00000624204 MORN5Q5VZ52 161 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 RASL11AQ6T310 242 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 OR9G1Q8NH87 305 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 LINC00470Q9BZP3 86 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 F11RQ9Y624 299 aaKnown RBP12.42□□□□□ -0.42
PMS1-221ENST00000624204 KLK10O43240 276 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 CFIP05156 583 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 C8orf88P0DMB2 117 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 BHLHA15Q7RTS1 189 aaPredicted RBP12.42□□□□□ -0.42
PMS1-221ENST00000624204 TEX45Q8NA69 505 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 PCNX1Q96RV3 2341 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 IGKV1OR2-108A0A075B7D4 117 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 C5orf17Q8NAS9 161 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 DEFB108BQ8NET1 73 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 WFDC12Q8WWY7 111 aa12.42□□□□□ -0.42
PMS1-221ENST00000624204 K7EMI3 77 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 LYZL6O75951 148 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 HIST1H1EP10412 219 aaKnown RBP12.41□□□□□ -0.42
PMS1-221ENST00000624204 ZNRD1Q9P1U0 126 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 CACNA1HO95180 2353 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 SMPD2O60906 423 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 OR2J3O76001 311 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 AGFG2O95081 481 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 HLA-DRB1P01911 266 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 HBBP68871 147 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 TMEM97Q5BJF2 176 aa12.41□□□□□ -0.42
PMS1-221ENST00000624204 MED13LQ71F56 2210 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 LOC389332A0A1B0GUA5 103 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 J3QR06 171 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 FAM162BQ5T6X4 162 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 TMEM186Q96B77 213 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 LOXL2Q9Y4K0 774 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 G3V4G9 280 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 CRXO43186 299 aaPredicted RBP12.4□□□□□ -0.42
PMS1-221ENST00000624204 SP1P08047 785 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 HSPE1P61604 102 aaKnown RBP12.4□□□□□ -0.42
PMS1-221ENST00000624204 TBC1D28Q2M2D7 210 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 RND1Q92730 232 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 IDI2-AS1Q9NZ38 188 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 CYB561P49447 251 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 PRSS57Q6UWY2 283 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 OR8A1Q8NGG7 326 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 MBD6Q96DN6 1003 aa12.4□□□□□ -0.42
PMS1-221ENST00000624204 C15orf61A6NNL5 157 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 FOLR3P41439 243 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 MAGEA5P43359 124 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 MRPL49Q13405 166 aaKnown RBP12.39□□□□□ -0.43
PMS1-221ENST00000624204 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 SPEM1Q8N4L4 309 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 SLC25A33Q9BSK2 321 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 TRIOBPQ9H2D6 2365 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 TACC2O95359 2948 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 PEX7O00628 323 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 CHEK1O14757 476 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 LIPFP07098 398 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 FAM201AQ5SY85 155 aa12.39□□□□□ -0.43
PMS1-221ENST00000624204 SAMD13Q5VXD3 122 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms