RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 C12orf54Q6X4T0 127 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 FBXL7Q9UJT9 491 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 LINC00473A8K010 186 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 FOXH1O75593 365 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 RPP21Q9H633 154 aaKnown RBP13.38□□□□□ -0.27
GABRB3-215ENST00000622697 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
GABRB3-215ENST00000622697 GPX1P07203 203 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 TMEM136Q6ZRR5 245 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 HIST1H2BLQ99880 126 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 ZNF407Q9C0G0 2248 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 ERASQ7Z444 233 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
GABRB3-215ENST00000622697 PMCHL2Q9BQD1 86 aa13.38□□□□□ -0.27
GABRB3-215ENST00000622697 COTL1Q14019 142 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 Q6P435 159 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 TRBV20OR9-2A0A075B6H5 130 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 IGHV3OR16-12A0A075B7B8 117 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 FAM74A4Q5TZK3 123 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 EBLN2Q6P2I7 272 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 CDKN1AP38936 164 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 SRSF7Q16629 238 aaKnown RBP eCLIP13.37□□□□□ -0.27
GABRB3-215ENST00000622697 GGTLC1Q9BX51 225 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 TIMP3P35625 211 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 ATP5J2P56134 94 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 MST1LQ2TV78 715 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 SEPSECSQ9HD40 501 aaKnown RBP13.37□□□□□ -0.27
GABRB3-215ENST00000622697 NRN1Q9NPD7 142 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
GABRB3-215ENST00000622697 A0A1W2PS18 150 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 IZUMO1RA6ND01 250 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 HEATR1Q9H583 2144 aaKnown RBP13.36□□□□□ -0.27
GABRB3-215ENST00000622697 SRRM5B3KS81 715 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-215ENST00000622697 C21orf62Q9NYP8 219 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 CEACAM1P13688 526 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 PRCDQ00LT1 54 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 HIST1H1AQ02539 215 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-215ENST00000622697 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 PARD6GQ9BYG4 376 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-215ENST00000622697 RPS20P60866 119 aaKnown RBP13.36□□□□□ -0.27
GABRB3-215ENST00000622697 HIST3H2BBQ8N257 126 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 C1orf147Q96MC9 270 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-215ENST00000622697 PLXNA2O75051 1894 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 GFRA3O60609 400 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 CD69Q07108 199 aa13.36□□□□□ -0.27
GABRB3-215ENST00000622697 EEF1AKMT3Q96AZ1 226 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 A0A1B0GUT8 65 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 COQ2Q96H96 371 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 PRELID3AQ96N28 172 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 LOC107984156A0A0G2JMH3 177 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 ARL17AQ8IVW1 177 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 LIME1Q9H400 295 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 IGKV1-6A0A0C4DH72 117 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-215ENST00000622697 TRGV3P03979 118 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 LYL1P12980 280 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 LYRM7Q5U5X0 104 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 ARPC1AQ92747 370 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 GPR82Q96P67 336 aa13.35□□□□□ -0.27
GABRB3-215ENST00000622697 TICRRQ7Z2Z1 1910 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 CLEC19AQ6UXS0 136 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 HIST1H4GQ99525 98 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 MGST2Q99735 147 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 TMEM133Q9H2Q1 129 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 M0R381 172 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 FOXL2NBQ6ZUU3 175 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 FMC1Q96HJ9 113 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 MLNRO43193 412 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 TMEM160Q9NX00 188 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 TAS2R60P59551 318 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 KLRB1Q12918 225 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 SAPCD1Q5SSQ6 148 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 TMEM14EPQ6UXP3 125 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 DLX6P56179 175 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 FAM53AQ6NSI3 398 aaPredicted RBP13.34□□□□□ -0.27
GABRB3-215ENST00000622697 PPP1R27Q86WC6 154 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 PIMREGQ9BSJ6 248 aa13.34□□□□□ -0.27
GABRB3-215ENST00000622697 PLSCR4Q9NRQ2 329 aa13.33□□□□□ -0.27
GABRB3-215ENST00000622697 ZNF324O75467 553 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-215ENST00000622697 MDS2Q8NDY4 140 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 DIDO1Q9BTC0 2240 aaKnown RBP13.33□□□□□ -0.28
GABRB3-215ENST00000622697 TCRBV4S1A1TA0A5B7 111 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 EPDR1Q9UM22 224 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 INTS1Q8N201 2190 aaKnown RBP13.33□□□□□ -0.28
GABRB3-215ENST00000622697 AMBPP02760 352 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 SFTPCP11686 197 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 CFPP27918 469 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 COL6A6A6NMZ7 2263 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 CRXO43186 299 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-215ENST00000622697 FABP2P12104 132 aa13.33□□□□□ -0.28
GABRB3-215ENST00000622697 GOLGB1Q14789 3259 aaKnown RBP13.32□□□□□ -0.28
GABRB3-215ENST00000622697 PROK2Q9HC23 129 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 STAG3L2P0CL84 134 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 STAG3L3P0CL85 134 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 TRAV8-6A0A0B4J262 113 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 K7ERU9 68 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 NTF4P34130 210 aa13.32□□□□□ -0.28
GABRB3-215ENST00000622697 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms