RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	ZNF137P	P52743	207 aa		11.77	□□□□□ -0.53
SYNRG-231	ENST00000622045	ZNF138	P52744	262 aa		11.77	□□□□□ -0.53
SYNRG-231	ENST00000622045	UBALD2	Q8IYN6	164 aa		11.77	□□□□□ -0.53
SYNRG-231	ENST00000622045	TMEM167B	Q9NRX6	74 aa		11.77	□□□□□ -0.53
SYNRG-231	ENST00000622045	FAM90A9P	A6NNJ1	464 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	TMPRSS3	P57727	454 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	TMEM178A	Q8NBL3	297 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	MGST3	O14880	152 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	FOXE3	Q13461	319 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045		Q6ZT83	130 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045		K7ERU9	68 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	CECR9	P0C854	216 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	UTF1	Q5T230	341 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	SNRNP40	Q96DI7	357 aa	Known RBP	11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	CEP250	Q9BV73	2442 aa		11.76	□□□□□ -0.53
SYNRG-231	ENST00000622045	HSBP1L1	C9JCN9	74 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	APOA2	P02652	100 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	PPOX	P50336	477 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	CLEC2A	Q6UVW9	174 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	TCF24	Q7RTU0	167 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	MDS2	Q8NDY4	140 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	ROS1	P08922	2347 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	TET2	Q6N021	2002 aa	Predicted RBP	11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	C15orf61	A6NNL5	157 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	HIGD1C	A8MV81	97 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	MORN5	Q5VZ52	161 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	DEFB108B	Q8NET1	73 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	OR51B2	Q9Y5P1	312 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045		J3QR06	171 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	CALY	Q9NYX4	217 aa		11.75	□□□□□ -0.53
SYNRG-231	ENST00000622045	PCSK5	Q92824	1860 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	KIR2DS2	P43631	304 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	UBE2L3	P68036	154 aa	Known RBP	11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	MZT1	Q08AG7	82 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	VWA1	Q6PCB0	445 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	LHFPL4	Q7Z7J7	247 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	DEFB125	Q8N687	156 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	OR9G1	Q8NH87	305 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	URB1-AS1	Q96HZ7	61 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	ARRDC1-AS1	Q9H2J1	176 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	IFI27L2	Q9H2X8	130 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	IGKV1D-17	A0A075B6S4	117 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	PPIAL4D	F5H284	164 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	CSN3	P07498	182 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	PYY	P10082	97 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	TAS2R45	P59539	299 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	PRR20E	P86478	221 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	PRR20C	P86479	221 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	PRR20D	P86480	221 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	PRR20B	P86481	221 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	PRR20A	P86496	221 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	IGF2BP2-AS1	Q96M15	143 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	LEPROTL1	O95214	131 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	IGHV3-48	P01763	117 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	SPRY4	Q9C004	299 aa		11.74	□□□□□ -0.53
SYNRG-231	ENST00000622045	SYS1-DBNDD2	H3BUS1	97 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	GNG5	P63218	68 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	FAM201A	Q5SY85	155 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	MOGAT3	Q86VF5	341 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	DSP	P15924	2871 aa	Known RBP	11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	IGKV1OR2-108	A0A075B7D4	117 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	SPRY3	O43610	288 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	GOSR1	O95249	250 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	PLAU	P00749	431 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	C1orf210	Q8IVY1	113 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	CHRDL1	Q9BU40	450 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	ST20	Q9HBF5	79 aa		11.73	□□□□□ -0.53
SYNRG-231	ENST00000622045	VWC2L	B2RUY7	222 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	DHRS13	Q6UX07	377 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	TRGV8	A0A0C4DH27	118 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045		A0A1W2PNU3	283 aa	Predicted RBP	11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	IGKV3-15	P01624	115 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	SAA2	P0DJI9	122 aa	Predicted RBP	11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	C12orf54	Q6X4T0	127 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	OR2V2	Q96R30	315 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	ARFGEF3	Q5TH69	2177 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	IGHV1-24	A0A0C4DH33	117 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	LOXL3	P58215	753 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	CT45A1	Q5HYN5	189 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	CT45A3	Q8NHU0	189 aa		11.72	□□□□□ -0.53
SYNRG-231	ENST00000622045	GAGE10	A6NGK3	116 aa		11.71	□□□□□ -0.53
SYNRG-231	ENST00000622045	C7orf71	A4D174	169 aa		11.71	□□□□□ -0.53
SYNRG-231	ENST00000622045	CCL11	P51671	97 aa		11.71	□□□□□ -0.53
SYNRG-231	ENST00000622045	FAM120AOS	Q5T036	256 aa		11.71	□□□□□ -0.53
SYNRG-231	ENST00000622045	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.71	□□□□□ -0.53
SYNRG-231	ENST00000622045	SRRM5	B3KS81	715 aa		11.71	□□□□□ -0.54
SYNRG-231	ENST00000622045	PRB4	P10163	310 aa	Predicted RBP	11.71	□□□□□ -0.54
SYNRG-231	ENST00000622045	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.71	□□□□□ -0.54
SYNRG-231	ENST00000622045	TMEM191A	Q9H0A3	160 aa		11.71	□□□□□ -0.54
SYNRG-231	ENST00000622045	IDI2-AS1	Q9NZ38	188 aa		11.71	□□□□□ -0.54
SYNRG-231	ENST00000622045	GCSAM	Q8N6F7	178 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	GRAMD2B	Q96HH9	432 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	PGLYRP4	Q96LB8	373 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	PRND	Q9UKY0	176 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	ABCA1	O95477	2261 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	FAM231B	A6NCW3	169 aa		11.7	□□□□□ -0.54
SYNRG-231	ENST00000622045	FAM90A1	Q86YD7	464 aa		11.7	□□□□□ -0.54

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