RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 FDCSPQ8NFU4 85 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 ABHD17AQ96GS6 310 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 BRCA1P38398 1863 aaKnown RBP8.32□□□□□ -1.08
COL4A6-210ENST00000621266 Q6AWC8 147 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 CIARTQ8N365 385 aaPredicted RBP8.32□□□□□ -1.08
COL4A6-210ENST00000621266 NPIPB11E5RHQ5 1161 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 TOMM40O96008 361 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 C1QL2Q7Z5L3 287 aa8.32□□□□□ -1.08
COL4A6-210ENST00000621266 C17orf98A8MV24 154 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 BTCP35070 178 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 MCRIP2Q9BUT9 160 aaKnown RBP8.31□□□□□ -1.08
COL4A6-210ENST00000621266 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 TDRD6O60522 2096 aaKnown RBP8.31□□□□□ -1.08
COL4A6-210ENST00000621266 CD55P08174 381 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 NPSP0C0P6 89 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 GLMPQ8WWB7 406 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 WFDC1Q9HC57 220 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 TSSC4Q9Y5U2 329 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-210ENST00000621266 CD28P10747 220 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 SCN8AQ9UQD0 1980 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 VSIRQ9H7M9 311 aa8.31□□□□□ -1.08
COL4A6-210ENST00000621266 NAPSAO96009 420 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 CLEC7AQ9BXN2 247 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 LAMTOR3Q9UHA4 124 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 NEUROG3Q9Y4Z2 214 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 SCN5AQ14524 2016 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 C9JAW5 83 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 LINC00158P58513 81 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 ZXDCQ2QGD7 858 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-210ENST00000621266 TMEM42Q69YG0 159 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 S100A7L2Q5SY68 101 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 C1orf174Q8IYL3 243 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 SRSF8Q9BRL6 282 aaKnown RBP8.3□□□□□ -1.08
COL4A6-210ENST00000621266 OSTCQ9NRP0 149 aa8.3□□□□□ -1.08
COL4A6-210ENST00000621266 IGHV1-69-2A0A0G2JMI3 117 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 FGF16O43320 207 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 GLRXP35754 106 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 C18orf12Q96KH6 178 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 SEC16AO15027 2179 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 DOCK3Q8IZD9 2030 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 OTOFQ9HC10 1997 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 VWC2LB2RUY7 222 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 F8VVB4 439 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 F8VWA3 439 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 PYYP10082 97 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 ACTL10Q5JWF8 245 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 SEPSECSQ9HD40 501 aaKnown RBP8.29□□□□□ -1.08
COL4A6-210ENST00000621266 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 NCR2O95944 276 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 C3orf79P0CE67 100 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 TEX38Q6PEX7 206 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 UNQ6494/PRO21346Q6UXR6 183 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 SAXO1Q8IYX7 474 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 A0A0G2JK05 382 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 GHRHP01286 108 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 PLPPR1Q8TBJ4 325 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 LY6G6FQ5SQ64 297 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 ATP6V0BQ99437 205 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 MBNL3Q9NUK0 354 aaKnown RBP8.29□□□□□ -1.08
COL4A6-210ENST00000621266 HS3ST3B1Q9Y662 390 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 ITGB1BP1O14713 200 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 MLNRO43193 412 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 NCOR1P1Q9H4R4 102 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 OTORQ9NRC9 128 aa8.29□□□□□ -1.08
COL4A6-210ENST00000621266 SPTA1P02549 2419 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 FAM231BA6NCW3 169 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 CRPP02741 224 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 CCL1P22362 96 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 LHX2P50458 406 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 ITLN2Q8WWU7 325 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-210ENST00000621266 SCARF2Q96GP6 870 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-210ENST00000621266 NPIPB13A6NJU9 1138 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 NPIPB5A8MRT5 1133 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 CD7P09564 240 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 IFI6P09912 130 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 FAM90A2PQ658T7 463 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 TCF20Q9UGU0 1960 aaKnown RBP8.28□□□□□ -1.08
COL4A6-210ENST00000621266 CD5P06127 495 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 SPACA3Q8IXA5 215 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 ZNRF1Q8ND25 227 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 LINC01587Q99440 93 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 REPIN1Q9BWE0 567 aaKnown RBP8.28□□□□□ -1.08
COL4A6-210ENST00000621266 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.28□□□□□ -1.08
COL4A6-210ENST00000621266 H0YIZ8 118 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 WFDC12Q8WWY7 111 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 CHD5Q8TDI0 1954 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 TRIOBPQ9H2D6 2365 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 A0A1B0GTI1 187 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 TMEM238C9JI98 176 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 LINC01590Q5TEZ4 76 aa8.28□□□□□ -1.08
COL4A6-210ENST00000621266 PTGDSP41222 190 aa8.27□□□□□ -1.08
COL4A6-210ENST00000621266 PRB3Q04118 309 aaPredicted RBP8.27□□□□□ -1.08
COL4A6-210ENST00000621266 LAGE3Q14657 143 aa8.27□□□□□ -1.08
COL4A6-210ENST00000621266 ORMDL2Q53FV1 153 aa8.27□□□□□ -1.08
COL4A6-210ENST00000621266 FBXL15Q9H469 300 aa8.27□□□□□ -1.08
COL4A6-210ENST00000621266 TRBV24-1A0A075B6N3 115 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 A0A1W2PR77 199 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 UCP1P25874 307 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms