RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.84□□□□□ -0.99
CDH1-214ENST00000621016 ACTL6BO94805 426 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 CA2P00918 260 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 SRP14P37108 136 aaKnown RBP8.84□□□□□ -0.99
CDH1-214ENST00000621016 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 ZNF645Q8N7E2 425 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 DEFB124Q8NES8 71 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 OR8G5Q8NG78 346 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 LSM10Q969L4 123 aaKnown RBP8.84□□□□□ -0.99
CDH1-214ENST00000621016 JMJD8Q96S16 334 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 CLCF1Q9UBD9 225 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 PEF1Q9UBV8 284 aaKnown RBP8.84□□□□□ -0.99
CDH1-214ENST00000621016 LSM4Q9Y4Z0 139 aaKnown RBP8.84□□□□□ -0.99
CDH1-214ENST00000621016 IGFBP2P18065 325 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 BRWD1-AS2P59051 145 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 KIR3DL3Q8N743 410 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 NEU4Q8WWR8 484 aaPredicted RBP8.84□□□□□ -0.99
CDH1-214ENST00000621016 ZNRD1Q9P1U0 126 aa8.84□□□□□ -0.99
CDH1-214ENST00000621016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 M0R1B8 84 aa8.83□□□□□ -1
CDH1-214ENST00000621016 SS18L1O75177 396 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 NDUFB4O95168 129 aa8.83□□□□□ -1
CDH1-214ENST00000621016 KITLGP21583 273 aa8.83□□□□□ -1
CDH1-214ENST00000621016 NPY1RP25929 384 aa8.83□□□□□ -1
CDH1-214ENST00000621016 ATP5G3P48201 142 aa8.83□□□□□ -1
CDH1-214ENST00000621016 TRIP6Q15654 476 aaKnown RBP8.83□□□□□ -1
CDH1-214ENST00000621016 Q8IYB0 196 aa8.83□□□□□ -1
CDH1-214ENST00000621016 DEFB125Q8N687 156 aa8.83□□□□□ -1
CDH1-214ENST00000621016 TMEM265A0A087WTH1 108 aa8.83□□□□□ -1
CDH1-214ENST00000621016 A0A1W2PS18 150 aa8.83□□□□□ -1
CDH1-214ENST00000621016 SH2D7A6NKC9 451 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 C11orf94C9JXX5 98 aa8.83□□□□□ -1
CDH1-214ENST00000621016 SPINT2O43291 252 aa8.83□□□□□ -1
CDH1-214ENST00000621016 ERVK11-1P61568 191 aa8.83□□□□□ -1
CDH1-214ENST00000621016 BHLHA15Q7RTS1 189 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 LINC00596Q86U02 117 aa8.83□□□□□ -1
CDH1-214ENST00000621016 ZCCHC24Q8N2G6 241 aaKnown RBP8.83□□□□□ -1
CDH1-214ENST00000621016 OR4A16Q8NH70 328 aa8.83□□□□□ -1
CDH1-214ENST00000621016 CDC42EP3Q9UKI2 254 aa8.83□□□□□ -1
CDH1-214ENST00000621016 ZGRF1Q86YA3 2104 aa8.83□□□□□ -1
CDH1-214ENST00000621016 LRBAP50851 2863 aa8.83□□□□□ -1
CDH1-214ENST00000621016 OOEPA6NGQ2 149 aa8.83□□□□□ -1
CDH1-214ENST00000621016 OR9G9P0C7N8 305 aa8.83□□□□□ -1
CDH1-214ENST00000621016 WT1P19544 449 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 COX5AP20674 150 aa8.83□□□□□ -1
CDH1-214ENST00000621016 SRIP30626 198 aa8.83□□□□□ -1
CDH1-214ENST00000621016 SERF2P84101 59 aa8.83□□□□□ -1
CDH1-214ENST00000621016 ZNF146Q15072 292 aa8.83□□□□□ -1
CDH1-214ENST00000621016 TMEM249Q2WGJ8 235 aa8.83□□□□□ -1
CDH1-214ENST00000621016 PDLIM3Q53GG5 364 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 PEAR1Q5VY43 1037 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 DUX4L9Q6RFH8 374 aaPredicted RBP8.83□□□□□ -1
CDH1-214ENST00000621016 MOB1BQ7L9L4 216 aa8.83□□□□□ -1
CDH1-214ENST00000621016 MOGAT3Q86VF5 341 aa8.83□□□□□ -1
CDH1-214ENST00000621016 RPRMLQ8N4K4 120 aa8.83□□□□□ -1
CDH1-214ENST00000621016 TMEM116Q8NCL8 245 aa8.83□□□□□ -1
CDH1-214ENST00000621016 NPCDR1Q9BY65 106 aa8.83□□□□□ -1
CDH1-214ENST00000621016 PSG8Q9UQ74 426 aa8.83□□□□□ -1
CDH1-214ENST00000621016 PRDX2P32119 198 aa8.82□□□□□ -1
CDH1-214ENST00000621016 MIC13Q5XKP0 118 aa8.82□□□□□ -1
CDH1-214ENST00000621016 CD177Q8N6Q3 437 aa8.82□□□□□ -1
CDH1-214ENST00000621016 ASH1LQ9NR48 2969 aaKnown RBP8.82□□□□□ -1
CDH1-214ENST00000621016 CSMD1Q96PZ7 3565 aa8.82□□□□□ -1
CDH1-214ENST00000621016 ATRXP46100 2492 aa8.82□□□□□ -1
CDH1-214ENST00000621016 RRHO14718 337 aa8.82□□□□□ -1
CDH1-214ENST00000621016 IGHV3-48P01763 117 aa8.82□□□□□ -1
CDH1-214ENST00000621016 MRPL54Q6P161 138 aaKnown RBP8.82□□□□□ -1
CDH1-214ENST00000621016 C11orf53Q8IXP5 236 aa8.82□□□□□ -1
CDH1-214ENST00000621016 TMEM147Q9BVK8 224 aa8.82□□□□□ -1
CDH1-214ENST00000621016 MRPL27Q9P0M9 148 aaKnown RBP8.82□□□□□ -1
CDH1-214ENST00000621016 ZZEF1O43149 2961 aa8.82□□□□□ -1
CDH1-214ENST00000621016 C19orf67A6NJJ6 358 aa8.82□□□□□ -1
CDH1-214ENST00000621016 ISLRO14498 428 aa8.82□□□□□ -1
CDH1-214ENST00000621016 CA1P00915 261 aaPredicted RBP8.82□□□□□ -1
CDH1-214ENST00000621016 FAM87AP0C7U9 286 aa8.82□□□□□ -1
CDH1-214ENST00000621016 ARL3P36405 182 aa8.82□□□□□ -1
CDH1-214ENST00000621016 KIR2DL2P43627 348 aaPredicted RBP8.82□□□□□ -1
CDH1-214ENST00000621016 ZNF718Q3SXZ3 478 aa8.82□□□□□ -1
CDH1-214ENST00000621016 SH2D6Q7Z4S9 175 aa8.82□□□□□ -1
CDH1-214ENST00000621016 SNRNP40Q96DI7 357 aaKnown RBP8.82□□□□□ -1
CDH1-214ENST00000621016 TRAV9-2A0A087WT02 112 aa8.81□□□□□ -1
CDH1-214ENST00000621016 Q6ZT83 130 aa8.81□□□□□ -1
CDH1-214ENST00000621016 C3orf56Q8N813 242 aa8.81□□□□□ -1
CDH1-214ENST00000621016 OR2K2Q8NGT1 345 aa8.81□□□□□ -1
CDH1-214ENST00000621016 COL6A6A6NMZ7 2263 aa8.81□□□□□ -1
CDH1-214ENST00000621016 MDFIC2A0A1B0GVS7 189 aa8.81□□□□□ -1
CDH1-214ENST00000621016 C5orf64Q2M2E5 130 aa8.81□□□□□ -1
CDH1-214ENST00000621016 TMEM14EPQ6UXP3 125 aa8.81□□□□□ -1
CDH1-214ENST00000621016 ANAPC16Q96DE5 110 aa8.81□□□□□ -1
CDH1-214ENST00000621016 CXXC4Q9H2H0 198 aa8.81□□□□□ -1
CDH1-214ENST00000621016 SPCS1Q9Y6A9 102 aa8.81□□□□□ -1
CDH1-214ENST00000621016 SVEP1Q4LDE5 3571 aa8.81□□□□□ -1
CDH1-214ENST00000621016 COL12A1Q99715 3063 aa8.81□□□□□ -1
CDH1-214ENST00000621016 CLDN14O95500 239 aa8.8□□□□□ -1
CDH1-214ENST00000621016 CD1BP29016 333 aa8.8□□□□□ -1
CDH1-214ENST00000621016 ZNF134P52741 427 aa8.8□□□□□ -1
CDH1-214ENST00000621016 SPATA12Q7Z6I5 190 aa8.8□□□□□ -1
CDH1-214ENST00000621016 MBD3L1Q8WWY6 194 aa8.8□□□□□ -1
CDH1-214ENST00000621016 RND1Q92730 232 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms