RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 IFNA1P01562 189 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 ZNF705DP0CH99 300 aaPredicted RBP8.01□□□□□ -1.13
VTA1-205ENST00000620996 ZNF705BP0CI00 300 aaPredicted RBP8.01□□□□□ -1.13
VTA1-205ENST00000620996 RAB31Q13636 194 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 CLDND2Q8NHS1 167 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 ABHD5Q8WTS1 349 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 MGST2Q99735 147 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 SPG11Q96JI7 2443 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 EPG5Q9HCE0 2579 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 IGHV3-21A0A0B4J1V1 117 aa8□□□□□ -1.13
VTA1-205ENST00000620996 TMEM238C9JI98 176 aa8□□□□□ -1.13
VTA1-205ENST00000620996 GOSR1O95249 250 aa8□□□□□ -1.13
VTA1-205ENST00000620996 CNIH1O95406 144 aa8□□□□□ -1.13
VTA1-205ENST00000620996 IGFBP2P18065 325 aa8□□□□□ -1.13
VTA1-205ENST00000620996 OPRK1P41145 380 aa8□□□□□ -1.13
VTA1-205ENST00000620996 DLK1P80370 383 aa8□□□□□ -1.13
VTA1-205ENST00000620996 ICAM4Q14773 271 aa8□□□□□ -1.13
VTA1-205ENST00000620996 MMDQ15546 238 aa8□□□□□ -1.13
VTA1-205ENST00000620996 CLEC12BQ2HXU8 276 aa8□□□□□ -1.13
VTA1-205ENST00000620996 LEMD1Q68G75 181 aa8□□□□□ -1.13
VTA1-205ENST00000620996 TEPPQ6URK8 271 aa8□□□□□ -1.13
VTA1-205ENST00000620996 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
VTA1-205ENST00000620996 BEND2Q8NDZ0 799 aa8□□□□□ -1.13
VTA1-205ENST00000620996 NUDT10Q8NFP7 164 aa8□□□□□ -1.13
VTA1-205ENST00000620996 TMEM167AQ8TBQ9 72 aa8□□□□□ -1.13
VTA1-205ENST00000620996 CTXND1A0A1B0GTU2 59 aa8□□□□□ -1.13
VTA1-205ENST00000620996 ZNF320A2RRD8 509 aa8□□□□□ -1.13
VTA1-205ENST00000620996 IGLV2-23P01705 113 aa8□□□□□ -1.13
VTA1-205ENST00000620996 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
VTA1-205ENST00000620996 UBE2G2P60604 165 aa8□□□□□ -1.13
VTA1-205ENST00000620996 C19orf35Q6ZS72 473 aa8□□□□□ -1.13
VTA1-205ENST00000620996 C8orf46Q8TAG6 207 aa8□□□□□ -1.13
VTA1-205ENST00000620996 DPM3Q9P2X0 92 aa8□□□□□ -1.13
VTA1-205ENST00000620996 FAM208BQ5VWN6 2430 aa8□□□□□ -1.13
VTA1-205ENST00000620996 A0A1W2PN81 502 aa8□□□□□ -1.13
VTA1-205ENST00000620996 BCL2P10415 239 aa8□□□□□ -1.13
VTA1-205ENST00000620996 CHRNA7P36544 502 aa8□□□□□ -1.13
VTA1-205ENST00000620996 LGALS7P47929 136 aa8□□□□□ -1.13
VTA1-205ENST00000620996 ZNF137PP52743 207 aa8□□□□□ -1.13
VTA1-205ENST00000620996 RHEBQ15382 184 aa8□□□□□ -1.13
VTA1-205ENST00000620996 VWC2Q2TAL6 325 aa8□□□□□ -1.13
VTA1-205ENST00000620996 TPTE2P1Q5T6R2 138 aa8□□□□□ -1.13
VTA1-205ENST00000620996 LY6G5BQ8NDX9 201 aa8□□□□□ -1.13
VTA1-205ENST00000620996 GATAD1Q8WUU5 269 aa8□□□□□ -1.13
VTA1-205ENST00000620996 GGTLC1Q9BX51 225 aa8□□□□□ -1.13
VTA1-205ENST00000620996 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
VTA1-205ENST00000620996 UTP20O75691 2785 aaKnown RBP8□□□□□ -1.13
VTA1-205ENST00000620996 FAM157AC9JC47 383 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 FSTL3O95633 263 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 IGHV4-39P01824 125 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 CD33P20138 364 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 GATA2P23769 480 aaPredicted RBP7.99□□□□□ -1.13
VTA1-205ENST00000620996 CEACAM3P40198 252 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 RPL27AP46776 148 aaKnown RBP7.99□□□□□ -1.13
VTA1-205ENST00000620996 JOSD1Q15040 202 aaPredicted RBP7.99□□□□□ -1.13
VTA1-205ENST00000620996 PSG5Q15238 335 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 SMIM15Q7Z3B0 74 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 SLC35E1Q96K37 410 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 NDUFA4L2Q9NRX3 87 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 USP9XQ93008 2570 aaPredicted RBP7.99□□□□□ -1.13
VTA1-205ENST00000620996 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 LOC102723971A0A1B0GUV8 181 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 RBP4P02753 201 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 IL6RP08887 468 aaPredicted RBP7.99□□□□□ -1.13
VTA1-205ENST00000620996 RNASE2P10153 161 aaKnown RBP7.99□□□□□ -1.13
VTA1-205ENST00000620996 WT1-ASQ06250 92 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 OR4A5Q8NH83 315 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 OR2T6Q8NHC8 308 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 NRGNQ92686 78 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 PERPQ96FX8 193 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 SCRT1Q9BWW7 348 aa7.99□□□□□ -1.13
VTA1-205ENST00000620996 NCBP2LA6PVI3 153 aaKnown RBP7.98□□□□□ -1.13
VTA1-205ENST00000620996 CCL25O15444 150 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 MPDU1O75352 247 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 SRP19P09132 144 aaKnown RBP7.98□□□□□ -1.13
VTA1-205ENST00000620996 SUB1P53999 127 aaKnown RBP eCLIP7.98□□□□□ -1.137e-9■■■■■ 46.1
VTA1-205ENST00000620996 ATP5J2P56134 94 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 ZNF506Q5JVG8 444 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 LDLRAD2Q5SZI1 272 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 CST9LP1Q5W188 147 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 MMD2Q8IY49 270 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 STPG3Q8N7X2 389 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 OR5R1Q8NH85 324 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 MAP1AP78559 2803 aaPredicted RBP7.98□□□□□ -1.13
VTA1-205ENST00000620996 IGHV3OR16-10A0A075B7F0 116 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 A0A1W2PPI3 338 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 M0R1W7 72 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 TOX4O94842 621 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 AMBPP02760 352 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 PRTN3P24158 256 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 OR10J1P30954 320 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 PSMB3P49720 205 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 PDLIM4P50479 330 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 GAGE1Q13065 139 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 OR4F5Q8NH21 305 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 MBD3L1Q8WWY6 194 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 OR4F4Q96R69 305 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 PRSS46E5RG02 174 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms