RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CBLN3Q6UW01 205 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 SLC25A38Q96DW6 304 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 ICAM4Q14773 271 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 GGTLC1Q9BX51 225 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 SNAI2O43623 268 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 CGB3P0DN86 165 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 PPDPFLQ8WWR9 84 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 CLEC7AQ9BXN2 247 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 IGHV3OR15-7A0A075B7D8 119 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 LEPROTO15243 131 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 DUSP14O95147 198 aaKnown RBP6.07□□□□□ -1.44
COLCA1-205ENST00000620864 ATP1A1-AS1Q5TC04 95 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 PVRIGQ6DKI7 326 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 TM2D1Q9BX74 207 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 TRGV11A0A075B6L2 103 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 CGB7P0DN87 165 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 GZMMP51124 257 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 CCL8P80075 99 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 ODF1Q14990 250 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 MYOD1P15172 320 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 TSPAN7P41732 249 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 DLL3Q9NYJ7 618 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 GBF1Q92538 1859 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 TMEM14DPA8MWL7 114 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 C9JCJ5 164 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 M0R381 172 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 FGF16O43320 207 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 PLAUP00749 431 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 CMC4P56277 68 aaPredicted RBP6.06□□□□□ -1.44
COLCA1-205ENST00000620864 FAM90A2PQ658T7 463 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 SPTBP11277 2137 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 MPZP25189 248 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 SPACA3Q8IXA5 215 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 JPT2Q9H910 190 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 TDGF1P3P51864 188 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 HCP5Q6MZN7 132 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 VN1R4Q7Z5H5 301 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 BCL6BQ8N143 479 aaPredicted RBP6.06□□□□□ -1.44
COLCA1-205ENST00000620864 CST9LQ9H4G1 147 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 DRD3P35462 400 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 RASL10AQ92737 203 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 UBE2WQ96B02 151 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 SIPA1L3O60292 1781 aaPredicted RBP6.06□□□□□ -1.44
COLCA1-205ENST00000620864 IGHV3-21A0A0B4J1V1 117 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 SCO2A0A1W2PP80 73 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 PATE4P0C8F1 98 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 SLC25A47Q6Q0C1 308 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 WFDC6Q9BQY6 131 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 MSRB2Q9Y3D2 182 aa6.06□□□□□ -1.44
COLCA1-205ENST00000620864 SPTBN1Q01082 2364 aaKnown RBP6.05□□□□□ -1.44
COLCA1-205ENST00000620864 CGB1A6NKQ9 187 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 TMEM144Q7Z5S9 345 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 LINC01555Q8NAE3 123 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 NPIPB3Q92617 1050 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 GTF3AQ92664 365 aaKnown RBP6.05□□□□□ -1.44
COLCA1-205ENST00000620864 AGMATQ9BSE5 352 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 Q9H3A6 140 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 LAMTOR3Q9UHA4 124 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 ARFGEF1Q9Y6D6 1849 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 SOCS3O14543 225 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 THY1P04216 161 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 CABIN1Q9Y6J0 2220 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 CD5P06127 495 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 GZMBP10144 247 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 REG1BP48304 166 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 SLC25A53Q5H9E4 307 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 MBNL3Q9NUK0 354 aaKnown RBP6.05□□□□□ -1.44
COLCA1-205ENST00000620864 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 COL5A3P25940 1745 aaPredicted RBP6.05□□□□□ -1.44
COLCA1-205ENST00000620864 CGAP01215 116 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 PPP1R27Q86WC6 154 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 UPK3AO75631 287 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 CT62P0C5K7 136 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 GP6Q9HCN6 339 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 RPL32P62910 135 aaKnown RBP6.05□□□□□ -1.44
COLCA1-205ENST00000620864 ACTL10Q5JWF8 245 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 GTSCR1Q86UQ5 136 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 DUX3Q96PT4 197 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 UBL5Q9BZL1 73 aa6.05□□□□□ -1.44
COLCA1-205ENST00000620864 IQCF6A8MYZ5 107 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 AHRRA9YTQ3 701 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 TMEM229AB2RXF0 380 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 AMBPP02760 352 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 PRTN3P24158 256 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 GAGE2AQ6NT46 116 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 CD28P10747 220 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 LMO1P25800 156 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 TMEM54Q969K7 222 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 MYLKQ15746 1914 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 SLC25A39Q9BZJ4 359 aaPredicted RBP6.04□□□□□ -1.44
COLCA1-205ENST00000620864 MCM3APO60318 1980 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 FCN3O75636 299 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 PSG1P11464 419 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 PSG4Q00888 419 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 KIR3DS1Q14943 382 aa6.04□□□□□ -1.44
COLCA1-205ENST00000620864 ADAMTSL5Q6ZMM2 481 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms