RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	PPOX	P50336	477 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	PRB3	Q04118	309 aa	Predicted RBP	7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	C10orf55	Q5SWW7	151 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	NHLRC2	Q8NBF2	726 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	HSBP1	O75506	76 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	CT45A10	P0DMU9	189 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	CBLN1	P23435	193 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	ARF6	P62330	175 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	C2orf83	Q53S99	150 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	HIST3H2BB	Q8N257	126 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	OR4F17	Q8NGA8	305 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507		Q8TCH9	128 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	RNASEH2C	Q8TDP1	164 aa	Known RBP	7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	MRPL18	Q9H0U6	180 aa	Known RBP	7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	KLF2	Q9Y5W3	355 aa	Predicted RBP	7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	TNRC6A	Q8NDV7	1962 aa	Known RBP	7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	CHEK1	O14757	476 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	MOS	P00540	346 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	LHB	P01229	141 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	CSN1S1	P47710	185 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	AMT	P48728	403 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	GAMT	Q14353	236 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	TBR1	Q16650	682 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	VKORC1	Q9BQB6	163 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	TMEM133	Q9H2Q1	129 aa		7.54	□□□□□ -1.2
RBFOX1-223	ENST00000620507	TNC	P24821	2201 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	GRIFIN	A4D1Z8	144 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	PGP	A6NDG6	321 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	LINC00305	Q7Z4B0	112 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	TMEM170A	Q8WVE7	144 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	IL36B	Q9NZH7	164 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	FOXH1	O75593	365 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	HTR1D	P28221	377 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	MFAP2	P55001	183 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	MLANA	Q16655	118 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	TEX38	Q6PEX7	206 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	LYPD2	Q6UXB3	125 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	PNKD	Q8N490	385 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	OR4A5	Q8NH83	315 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	C14orf144	Q96I85	54 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507		H0YJW9	148 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	GCG	P01275	180 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	LIPF	P07098	398 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	PFN1	P07737	140 aa	Known RBP	7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	HIST1H1E	P10412	219 aa	Known RBP	7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507		Q56UQ5	140 aa		7.53	□□□□□ -1.2
RBFOX1-223	ENST00000620507	PMS2P5	A8MQ11	134 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	GNG7	O60262	68 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	MT-ND6	P03923	174 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	BRWD1-AS2	P59051	145 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	AARD	Q4LEZ3	155 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	PYY3	Q5JQD4	70 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	EAF1	Q96JC9	268 aa	Predicted RBP	7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	HIST1H2BL	Q99880	126 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	THYN1	Q9P016	225 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	HIGD1A	Q9Y241	93 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	RPLP1	P05386	114 aa	Known RBP	7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	VAMP3	Q15836	100 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	VWC2	Q2TAL6	325 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	ZNF439	Q8NDP4	499 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	NEUROG1	Q92886	237 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	SGK494	Q96LW2	274 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	FBXL15	Q9H469	300 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	YTHDF2	Q9Y5A9	579 aa	Known RBP	7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	ANKHD1	Q8IWZ3	2542 aa	Known RBP	7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	PROP1	O75360	226 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	PRR30	Q53SZ7	412 aa	Predicted RBP	7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	TCF23	Q7RTU1	214 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507	IMMP2L	Q96T52	175 aa		7.52	□□□□□ -1.21
RBFOX1-223	ENST00000620507		P01737	135 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507		P0C879	139 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	IGHV1-8	P0DP01	117 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	TEX36	Q5VZQ5	186 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	TMEM167A	Q8TBQ9	72 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	VAMP8	Q9BV40	100 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	AAMDC	Q9H7C9	122 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	CUL9	Q8IWT3	2517 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507		A0A1W2PRE2	83 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507		H3BTX0	84 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	RNASE2	P10153	161 aa	Known RBP	7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	COMP	P49747	757 aa	Predicted RBP	7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	TCF15	Q12870	199 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	FOXL1	Q12952	345 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	KIAA1644	Q3SXP7	199 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	FAM222B	Q8WU58	562 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	GNB4	Q9HAV0	340 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	TRAV34	A0A0B4J273	112 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	APCS	P02743	223 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	COL8A1	P27658	744 aa		7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	RNASE7	Q9H1E1	156 aa	Known RBP	7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	TLN1	Q9Y490	2541 aa	Known RBP	7.51	□□□□□ -1.21
RBFOX1-223	ENST00000620507	SRRM4	A7MD48	611 aa	Known RBP	7.5	□□□□□ -1.21
RBFOX1-223	ENST00000620507		E7EQL1	145 aa		7.5	□□□□□ -1.21
RBFOX1-223	ENST00000620507	FNDC10	F2Z333	226 aa		7.5	□□□□□ -1.21
RBFOX1-223	ENST00000620507	GGCT	O75223	188 aa	Known RBP	7.5	□□□□□ -1.21
RBFOX1-223	ENST00000620507	PYY	P10082	97 aa		7.5	□□□□□ -1.21
RBFOX1-223	ENST00000620507	BRS3	P32247	399 aa		7.5	□□□□□ -1.21
RBFOX1-223	ENST00000620507	GPR6	P46095	362 aa	Predicted RBP	7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms