RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 LYPD2Q6UXB3 125 aa11.46□□□□□ -0.58
CIITA-213ENST00000618327 ZNF525Q8N782 197 aa11.46□□□□□ -0.58
CIITA-213ENST00000618327 C19orf24Q9BVV8 132 aa11.46□□□□□ -0.58
CIITA-213ENST00000618327 PARLQ9H300 379 aa11.46□□□□□ -0.58
CIITA-213ENST00000618327 GSN-AS1Q9NRJ2 163 aa11.46□□□□□ -0.58
CIITA-213ENST00000618327 MBNL3Q9NUK0 354 aaKnown RBP11.46□□□□□ -0.58
CIITA-213ENST00000618327 NCOR2Q9Y618 2525 aa11.46□□□□□ -0.58
CIITA-213ENST00000618327 IGLV3-9A0A075B6K5 115 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 IGHV2-26A0A0B4J1V2 119 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 CGAP01215 116 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 MGPP08493 103 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 ERVK11-1P61568 191 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 PRNTQ86SH4 94 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.45□□□□□ -0.58
CIITA-213ENST00000618327 ARL14EPLP0DKL9 152 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 SRIP30626 198 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 SMAD7O15105 426 aaKnown RBP11.45□□□□□ -0.58
CIITA-213ENST00000618327 NBR2O15453 112 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 GATAD1Q8WUU5 269 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 HLA-DRB1P01911 266 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 TFF3Q07654 80 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 OR51G1Q8NGK1 321 aa11.45□□□□□ -0.58
CIITA-213ENST00000618327 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
CIITA-213ENST00000618327 IL6RP08887 468 aaPredicted RBP11.44□□□□□ -0.58
CIITA-213ENST00000618327 CD24P25063 80 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 FCGR2BP31994 310 aaPredicted RBP11.44□□□□□ -0.58
CIITA-213ENST00000618327 PPP1R27Q86WC6 154 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 CREBBPQ92793 2442 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 IGKV1-6A0A0C4DH72 117 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 FAM90A9PA6NNJ1 464 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 TIMM23O14925 209 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 Q8TCH9 128 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 HSPB7Q9UBY9 170 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 ANAPC10Q9UM13 185 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 GRIFINA4D1Z8 144 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 BTF3P20290 206 aaKnown RBP11.44□□□□□ -0.58
CIITA-213ENST00000618327 NMSQ5H8A3 153 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 TMEM183AQ8IXX5 376 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 ARPC1AQ92747 370 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 A8MXK9 166 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 CKS2P33552 79 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 CTAG1AP78358 180 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 ATP5G2Q06055 141 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 TWIST1Q15672 202 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 METTL26Q96S19 204 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 RABAC1Q9UI14 185 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 NOTCH3Q9UM47 2321 aa11.44□□□□□ -0.58
CIITA-213ENST00000618327 IGFBP2P18065 325 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 CYP2G1PQ6ZSU1 146 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 ERASQ7Z444 233 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 CACNG8Q8WXS5 425 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 LOC105371267A0A1B0GV96 52 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 CARHSP1Q9Y2V2 147 aaKnown RBP11.43□□□□□ -0.58
CIITA-213ENST00000618327 PLCE1Q9P212 2302 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 IGKV1-5P01602 117 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 ATOH7Q8N100 152 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 LINC00469Q8N7U9 141 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 TEX45Q8NA69 505 aa11.43□□□□□ -0.58
CIITA-213ENST00000618327 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
CIITA-213ENST00000618327 SRSF12Q8WXF0 261 aaKnown RBP11.42□□□□□ -0.58
CIITA-213ENST00000618327 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
CIITA-213ENST00000618327 PCNX3Q9H6A9 2034 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 ANKHD1Q8IWZ3 2542 aaKnown RBP11.42□□□□□ -0.58
CIITA-213ENST00000618327 TMEM250H0YL14 139 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 MAS1LP35410 378 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
CIITA-213ENST00000618327 MRPL32Q9BYC8 188 aaKnown RBP11.42□□□□□ -0.58
CIITA-213ENST00000618327 PGPA6NDG6 321 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 LINC00473A8K010 186 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 LINC00587B1AMM8 73 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 H7C2G1 150 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 WISP2O76076 250 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 IGF2RP11717 2491 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 CD55P08174 381 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 HTN1P15515 57 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 DSCR9P59020 149 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 KRTAP27-1Q3LI81 207 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 HIST1H4GQ99525 98 aa11.42□□□□□ -0.58
CIITA-213ENST00000618327 NCOA6Q14686 2063 aaPredicted RBP11.42□□□□□ -0.58
CIITA-213ENST00000618327 IGHV3-35A0A0C4DH35 117 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 TMEM189A5PLL7 270 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 CFHR2P36980 270 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 SLC25A48Q6ZT89 311 aaKnown RBP11.41□□□□□ -0.58
CIITA-213ENST00000618327 EEF1AKMT3Q96AZ1 226 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 MIEN1Q9BRT3 115 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 IL4P05112 153 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 SCGB1A1P11684 91 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 TMEM155Q4W5P6 130 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 ATRAIDQ6UW56 229 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 ZNF324O75467 553 aaPredicted RBP11.41□□□□□ -0.58
CIITA-213ENST00000618327 TTC32Q5I0X7 151 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 OR52E5Q8NH55 327 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 WNT10AQ9GZT5 417 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 A0A1W2PS18 150 aa11.41□□□□□ -0.58
CIITA-213ENST00000618327 TAS2R60P59551 318 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms