RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 HOXA1P49639 335 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 ZFAND6Q6FIF0 208 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 TOMM20LQ6UXN7 152 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 ZNF600Q6ZNG1 722 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 MCFD2Q8NI22 146 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 RNASE11Q8TAA1 199 aaKnown RBP16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 IL17DQ8TAD2 202 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 TMEM230Q96A57 120 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 GPR146Q96CH1 333 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 SCGB3A2Q96PL1 93 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 OVOL2Q9BRP0 275 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 FNDC4Q9H6D8 234 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 ZFAND3Q9H8U3 227 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 ENY2Q9NPA8 101 aa16.6■□□□□ 0.25
ARHGEF1-223ENST00000617585 CD5P06127 495 aa16.59■□□□□ 0.25
ARHGEF1-223ENST00000617585 TMEM187Q14656 261 aa16.59■□□□□ 0.25
ARHGEF1-223ENST00000617585 WFDC3Q8IUB2 231 aa16.59■□□□□ 0.25
ARHGEF1-223ENST00000617585 OR4X1Q8NH49 305 aa16.59■□□□□ 0.25
ARHGEF1-223ENST00000617585 GINS3Q9BRX5 216 aa16.59■□□□□ 0.25
ARHGEF1-223ENST00000617585 VSIRQ9H7M9 311 aa16.59■□□□□ 0.25
ARHGEF1-223ENST00000617585 CACFD1Q9UGQ2 172 aa16.59■□□□□ 0.25
ARHGEF1-223ENST00000617585 CLN5O75503 358 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 HTR2BP41595 481 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 TMEM268Q5VZI3 342 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 MRPL36Q9P0J6 103 aaKnown RBP16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 CACNG5Q9UF02 275 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 UBQLN2Q9UHD9 624 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 TP53TG1Q9Y2A0 90 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 KCNIP3Q9Y2W7 256 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 DNAH1Q9P2D7 4330 aa16.58■□□□□ 0.24
ARHGEF1-223ENST00000617585 KIR2DL5BA0A0G2JN68 375 aa16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 KIR2DL5BA0A0G2JPC4 375 aa16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 CMC4P56277 68 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 C2orf83Q53S99 150 aa16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 Q6ZWC4 215 aa16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 KIR2DL5AQ8N109 375 aa16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 KIR2DL5BQ8NHK3 375 aa16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 PUS1Q9Y606 427 aaKnown RBP eCLIP16.57■□□□□ 0.24
ARHGEF1-223ENST00000617585 LCE6AA0A183 80 aa16.56■□□□□ 0.24
ARHGEF1-223ENST00000617585 A0A1B0GU03 582 aa16.56■□□□□ 0.24
ARHGEF1-223ENST00000617585 UBE2CO00762 179 aa16.56■□□□□ 0.24
ARHGEF1-223ENST00000617585 APOC4P55056 127 aa16.56■□□□□ 0.24
ARHGEF1-223ENST00000617585 SUPT4H1P63272 117 aaKnown RBP16.56■□□□□ 0.24
ARHGEF1-223ENST00000617585 MLANAQ16655 118 aa16.56■□□□□ 0.24
ARHGEF1-223ENST00000617585 TRIM63Q969Q1 353 aa16.56■□□□□ 0.24
ARHGEF1-223ENST00000617585 BMI1P35226 326 aa16.55■□□□□ 0.24
ARHGEF1-223ENST00000617585 OPRK1P41145 380 aa16.55■□□□□ 0.24
ARHGEF1-223ENST00000617585 KLF9Q13886 244 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-223ENST00000617585 NMSQ5H8A3 153 aa16.55■□□□□ 0.24
ARHGEF1-223ENST00000617585 TRAV30A0A087WSZ9 112 aa16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 IGHV3-49A0A0A0MS15 119 aa16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 A0A0B4J2A0 478 aa16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 RNASEH2CQ8TDP1 164 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 DEDD2Q8WXF8 326 aa16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 ST8SIA2Q92186 375 aa16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 RBM38Q9H0Z9 239 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 HEYLQ9NQ87 328 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 SHPKQ9UHJ6 478 aa16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 V9GYH0 126 aa16.54■□□□□ 0.24
ARHGEF1-223ENST00000617585 TRAV2A0A0B4J234 112 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 RPS10-NUDT3A0A1W2PQS6 291 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 IGKV1-17P01599 117 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 APOHP02749 345 aaPredicted RBP16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 SULT1A3P0DMM9 295 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 SULT1A4P0DMN0 295 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 PLECQ15149 4684 aaKnown RBP16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 LILRB2Q8N423 598 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 TMEM170AQ8WVE7 144 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 MCUBQ9NWR8 336 aa16.53■□□□□ 0.24
ARHGEF1-223ENST00000617585 SCGB2A1O75556 95 aa16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 SLC25A4P12235 298 aa16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 FAUP35544 74 aaKnown RBP16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 PAFAH1B2P68402 229 aa16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 ZNF79Q15937 498 aa16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 TCF24Q7RTU0 167 aa16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 SLC24A4Q8NFF2 622 aa16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 MAP6D1Q9H9H5 199 aa16.52■□□□□ 0.24
ARHGEF1-223ENST00000617585 IGHV3OR16-13A0A075B7E8 117 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 IGHV3-74A0A0B4J1X5 117 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 ZNF701M0R085 212 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 CRYBB3P26998 211 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 CCR6P51684 374 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 AP3S2P59780 193 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 SRPXP78539 464 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 PRSS54Q6PEW0 395 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 CCDC190Q86UF4 302 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 HSPB7Q9UBY9 170 aa16.51■□□□□ 0.23
ARHGEF1-223ENST00000617585 PIGBOS1A0A0B4J2F0 54 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 CEBPZOSA8MTT3 80 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 SPRY2O43597 315 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 IGLC1P0CG04 106 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 ANXA3P12429 323 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 AKR1C4P17516 323 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 NPPCP23582 126 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 TNFRSF9Q07011 255 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 LYZL2Q7Z4W2 148 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 NOXA1Q86UR1 476 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 APRG1Q8IVJ8 170 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 LGI3Q8N145 548 aa16.5■□□□□ 0.23
ARHGEF1-223ENST00000617585 TOMM5Q8N4H5 51 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms