RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 TRBV6-6A0A0A6YYG2 114 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 RRHO14718 337 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 MLANAQ16655 118 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 ASPHD1Q5U4P2 390 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 MOB3BQ86TA1 216 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 MUC15Q8N387 334 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 GNB4Q9HAV0 340 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 SELENOKQ9Y6D0 94 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 IGHV3-21A0A0B4J1V1 117 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 GATA2P23769 480 aaPredicted RBP11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 DUTP33316 252 aaKnown RBP11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 DIAPH2-AS1Q14236 149 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 NRN1Q9NPD7 142 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 TP73-AS1Q9UF72 201 aa11.87□□□□□ -0.51
SHROOM1-208ENST00000617339 SAA2-SAA4A0A096LPE2 208 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 SAA2P0DJI9 122 aaPredicted RBP11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 TMEM11P17152 192 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 COMPP49747 757 aaPredicted RBP11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 C15orf65H3BRN8 121 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 J3QW42 95 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 HYPMO75409 117 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 TIMP3P35625 211 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 IGFL3Q6UXB1 125 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 MS4A5Q9H3V2 200 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 FLNCQ14315 2725 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 CELSR1Q9NYQ6 3014 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 SELENOTP62341 195 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 ADIPOQQ15848 244 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 OR4B1Q8NGF8 309 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 ST6GALNAC6Q969X2 333 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 RCHY1Q96PM5 261 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 UQCR10Q9UDW1 63 aa11.86□□□□□ -0.51
SHROOM1-208ENST00000617339 FXYD3Q14802 87 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 Q5PR19 223 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 TMEM140Q9NV12 185 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 UTP20O75691 2785 aaKnown RBP11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 ATP6V1FQ16864 119 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 STUMQ69YW2 141 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 LSM10Q969L4 123 aaKnown RBP11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 PARD6GQ9BYG4 376 aaPredicted RBP11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 ZNF253O75346 499 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 FOXL1Q12952 345 aa11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 SRSF7Q16629 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 MRPL54Q6P161 138 aaKnown RBP11.85□□□□□ -0.51
SHROOM1-208ENST00000617339 PDLIM3Q53GG5 364 aaPredicted RBP11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 TMEM14EPQ6UXP3 125 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 TIMD4Q96H15 378 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 RPH3ALQ9UNE2 315 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 hADV38S2A0JD32 116 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 THBDP07204 575 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 C1orf174Q8IYL3 243 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 ZNF596Q8TC21 504 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 Q8TCH9 128 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 RNF2Q99496 336 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 ADH4P08319 380 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 GAL3ST2Q9H3Q3 398 aa11.84□□□□□ -0.51
SHROOM1-208ENST00000617339 PDE6DO43924 150 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 REG1AP05451 166 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 GPX1P07203 203 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 IGLC2P0DOY2 106 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 IGLC3P0DOY3 106 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 S100A7AQ86SG5 101 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 OR10W1Q8NGF6 305 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 HSD17B10Q99714 261 aaKnown RBP11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 SERTAD4Q9NUC0 356 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 C10orf55Q5SWW7 151 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 LGALS4P56470 323 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 ARF6P62330 175 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 RELBQ01201 579 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 ZNF738Q8NE65 137 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 IFI27L2Q9H2X8 130 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 SLC45A2Q9UMX9 530 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 TIMM9Q9Y5J7 89 aa11.83□□□□□ -0.52
SHROOM1-208ENST00000617339 C17orf100A8MU93 164 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 CD24P25063 80 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 SRIP30626 198 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 BPIFB3P59826 476 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 YPEL3P61236 119 aaPredicted RBP11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 C17orf58Q2M2W7 97 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 KBTBD11-OT1A0A1B0GTJ5 212 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 CNIH1O95406 144 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 C3orf79P0CE67 100 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 GNLYP22749 145 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 LOXL3P58215 753 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 UBE2V1Q13404 147 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 CDSNQ15517 529 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 Q56UQ5 140 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 MMD2Q8IY49 270 aa11.82□□□□□ -0.52
SHROOM1-208ENST00000617339 APOA2P02652 100 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 GAFA1Q96PS6 74 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 RAB9BQ9NP90 201 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 K7EN84 100 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 C19orf35Q6ZS72 473 aa11.81□□□□□ -0.52
SHROOM1-208ENST00000617339 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms