RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ZNF714	Q96N38	554 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PRND	Q9UKY0	176 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PPIAL4A	Q9Y536	164 aa		11.31	□□□□□ -0.6
CACNA1C-231	ENST00000616390	IGKV1OR2-108	A0A075B7D4	117 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	IGHV3-72	A0A0B4J1Y9	119 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR10J1	P30954	320 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TMPRSS3	P57727	454 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	C3orf36	Q3SXR2	165 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	C10orf55	Q5SWW7	151 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390		Q8NA96	180 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR9G1	Q8NH87	305 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OCC1	Q8TAD7	63 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	DYNLRB1	Q9NP97	96 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	LINC00312	Q9Y6C7	94 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SVEP1	Q4LDE5	3571 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390		M0QZ24	198 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR7C2	O60412	319 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	KCNIP4	Q6PIL6	250 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	NUP37	Q8NFH4	326 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SGMS2	Q8NHU3	365 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	HIST1H2BL	Q99880	126 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	COMMD5	Q9GZQ3	224 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ARHGAP32	A7KAX9	2087 aa		11.3	□□□□□ -0.6
CACNA1C-231	ENST00000616390	MDFIC2	A0A1B0GVS7	189 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ENSA	O43768	121 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TEX36	Q5VZQ5	186 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR2T6	Q8NHC8	308 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	NABP2	Q9BQ15	211 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PITPNC1	Q9UKF7	332 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	LOC105371242	A0A075B767	164 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	LYNX1	G3V0Z9	82 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SLC17A3	O00476	420 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	VENTX	O95231	258 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	LYNX1	P0DP58	116 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PRCD	Q00LT1	54 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SFRP2	Q96HF1	295 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	NGB	Q9NPG2	151 aa		11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	ASH1L	Q9NR48	2969 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1C-231	ENST00000616390	APOA2	P02652	100 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	REG1A	P05451	166 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	IL3RA	P26951	378 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TMEM144	Q7Z5S9	345 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	MSRB2	Q9Y3D2	182 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TRAV26-1	A0A087WT03	109 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390		A0A1B0GUS0	222 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TMEM178B	H3BS89	294 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	DVL1	O14640	695 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	NDUFB3	O43676	98 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	SAP30	O75446	220 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	FAM87A	P0C7U9	286 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	BRS3	P32247	399 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	FAM110A	Q9BQ89	295 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	PYGO2	Q9BRQ0	406 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	TMEM106B	Q9NUM4	274 aa		11.28	□□□□□ -0.6
CACNA1C-231	ENST00000616390	LINC00869	P0C866	280 aa		11.27	□□□□□ -0.6
CACNA1C-231	ENST00000616390	RPL29	P47914	159 aa	Known RBP	11.27	□□□□□ -0.6
CACNA1C-231	ENST00000616390	RBPJ	Q06330	500 aa		11.27	□□□□□ -0.6
CACNA1C-231	ENST00000616390	HLA-DRB5	Q30154	266 aa		11.27	□□□□□ -0.6
CACNA1C-231	ENST00000616390	OR1P1	Q8NH06	330 aa		11.27	□□□□□ -0.6
CACNA1C-231	ENST00000616390	FLYWCH2	Q96CP2	140 aa	Known RBP	11.27	□□□□□ -0.6
CACNA1C-231	ENST00000616390	CBLN4	Q9NTU7	201 aa		11.27	□□□□□ -0.6
CACNA1C-231	ENST00000616390	MED13L	Q71F56	2210 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SPINK4	O60575	86 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TGFA	P01135	160 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SSBP2	P81877	361 aa	Predicted RBP	11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	LRRC10	Q5BKY1	277 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ASPHD1	Q5U4P2	390 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	CTSZ	Q9UBR2	303 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TRAPPC1	Q9Y5R8	145 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390		H0YJW9	148 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	CRYBB3	P26998	211 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SRP14	P37108	136 aa	Known RBP	11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TMEM183A	Q8IXX5	376 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	RITA1	Q96K30	269 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ELOVL5	Q9NYP7	299 aa		11.27	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SPTBN1	Q01082	2364 aa	Known RBP	11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TRAV5	A0A0B4J249	113 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	RPL8	P62917	257 aa	Known RBP	11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PRR20E	P86478	221 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PRR20C	P86479	221 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PRR20D	P86480	221 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PRR20B	P86481	221 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PRR20A	P86496	221 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SPACA3	Q8IXA5	215 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	RNASE6	Q93091	150 aa	Known RBP	11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	PLAU	P00749	431 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	AMBP	P02760	352 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	RNASE2	P10153	161 aa	Known RBP	11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ID1	P41134	155 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ZNF833P	Q6ZTB9	187 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	BOD1L2	Q8IYS8	172 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ST6GALNAC3	Q8NDV1	305 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	VCX2	Q9H322	139 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TPSG1	Q9NRR2	321 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SLC45A2	Q9UMX9	530 aa		11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.26	□□□□□ -0.61
CACNA1C-231	ENST00000616390	SPTBN4	Q9H254	2564 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	IGHV3-21	A0A0B4J1V1	117 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	TRAV34	A0A0B4J273	112 aa		11.25	□□□□□ -0.61
CACNA1C-231	ENST00000616390	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms