RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 FOXF2Q12947 444 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 TRIP6Q15654 476 aaKnown RBP11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 LINC00596Q86U02 117 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 SMIM12Q96EX1 92 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 ZNRD1Q9P1U0 126 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 HIGD1CA8MV81 97 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 H0YJW9 148 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 H3BUT2 72 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 NABP2Q9BQ15 211 aa11.02□□□□□ -0.65
PCDHA11-202ENST00000616325 FAM231BA6NCW3 169 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 IZUMO1RA6ND01 250 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 C9JCJ5 164 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 KLRC4-KLRK1H3BQV0 150 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 MPDU1O75352 247 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 SP1P08047 785 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 TMEM108Q6UXF1 575 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 NAV3Q8IVL0 2385 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 SPRR3Q9UBC9 169 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 SPRY3O43610 288 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 CIDEAO60543 219 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 IGHV1-2P23083 117 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 GDF5OSQ5U4N7 250 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 Q8IYB0 196 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 NUP35Q8NFH5 326 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 OR1B1Q8NGR6 318 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 OR1N2Q8NGR9 330 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 TANC2Q9HCD6 1990 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 ABCA4P78363 2273 aa11.01□□□□□ -0.65
PCDHA11-202ENST00000616325 TNFSF15O95150 251 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 VWA1Q6PCB0 445 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 RND1Q92730 232 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 TCF19Q9Y242 345 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 SPTBN1Q01082 2364 aaKnown RBP11□□□□□ -0.65
PCDHA11-202ENST00000616325 SAA2-SAA4A0A096LPE2 208 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 TRBV6-6A0A0A6YYG2 114 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 GGTLC3B5MD39 225 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 TM4SF20Q53R12 229 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 S1PR3Q99500 378 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 C2orf70A6NJV1 201 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 APELAP0DMC3 54 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 CD46P15529 392 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 UBE2L3P68036 154 aaKnown RBP11□□□□□ -0.65
PCDHA11-202ENST00000616325 SRSF6Q13247 344 aaKnown RBP11□□□□□ -0.65
PCDHA11-202ENST00000616325 BLNKQ8WV28 456 aa11□□□□□ -0.65
PCDHA11-202ENST00000616325 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
PCDHA11-202ENST00000616325 H3BTX0 84 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 GFRA3O60609 400 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 DEFB125Q8N687 156 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 FER1L6-AS1Q8NA97 138 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 SNRNP40Q96DI7 357 aaKnown RBP10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 MBNL3Q9NUK0 354 aaKnown RBP10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 FOXE3Q13461 319 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 PGLYRP4Q96LB8 373 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 TPPP3Q9BW30 176 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 SYS1-DBNDD2H3BUS1 97 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 ISLRO14498 428 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 ZNF146Q15072 292 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 TMEM140Q9NV12 185 aa10.99□□□□□ -0.65
PCDHA11-202ENST00000616325 AKAP6Q13023 2319 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 PYYP10082 97 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 HTR1DP28221 377 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 GPR183P32249 361 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 GNG5P63218 68 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 RHOGP84095 191 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 COX19Q49B96 90 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 ZNF766Q5HY98 468 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 WDR82Q6UXN9 313 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 ACP7Q6ZNF0 438 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 BPIFA4PQ86YQ2 179 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 NRN1LQ496H8 165 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 BHLHA15Q7RTS1 189 aaPredicted RBP10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 GTSF1LQ9H1H1 148 aa10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 KLF13Q9Y2Y9 288 aaPredicted RBP10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 ZFHX2Q9C0A1 2572 aaPredicted RBP10.98□□□□□ -0.65
PCDHA11-202ENST00000616325 AREGP15514 252 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 PRDX2P32119 198 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 ARF6P62330 175 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 SMIM21Q3B7S5 101 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 DUX4L9Q6RFH8 374 aaPredicted RBP10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 ZBTB34Q8NCN2 500 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 CDX2Q99626 313 aaPredicted RBP10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 AMMECR1Q9Y4X0 333 aaPredicted RBP10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 LSM4Q9Y4Z0 139 aaKnown RBP10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 A0A1W2PNU3 283 aaPredicted RBP10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 NPIPB11E5RHQ5 1161 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 ZNF207O43670 478 aaKnown RBP10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 P0C879 139 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 REG1BP48304 166 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 TBR1Q16650 682 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 FAM214BQ7L5A3 538 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 MAP1LC3CQ9BXW4 147 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 A0A1W2PRE2 83 aa10.97□□□□□ -0.65
PCDHA11-202ENST00000616325 CYC1P08574 325 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms