RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ARL3P36405 182 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 CLEC19AQ6UXS0 136 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 LYZL2Q7Z4W2 148 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 FAM219AQ8IW50 185 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 NSG2Q9Y328 171 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 TMED3Q9Y3Q3 217 aa14.22□□□□□ -0.13
CDX1-202ENST00000616154 A0A0G2JRQ6 117 aa14.21□□□□□ -0.13
CDX1-202ENST00000616154 IGHV3-23P01764 117 aa14.21□□□□□ -0.13
CDX1-202ENST00000616154 CBLN1P23435 193 aa14.21□□□□□ -0.13
CDX1-202ENST00000616154 MFAP2P55001 183 aa14.21□□□□□ -0.13
CDX1-202ENST00000616154 CACNG8Q8WXS5 425 aa14.21□□□□□ -0.13
CDX1-202ENST00000616154 TMEM213A2RRL7 107 aa14.2□□□□□ -0.14
CDX1-202ENST00000616154 SLC25A6P12236 298 aa14.2□□□□□ -0.14
CDX1-202ENST00000616154 AARDQ4LEZ3 155 aa14.2□□□□□ -0.14
CDX1-202ENST00000616154 SLC16A13Q7RTY0 426 aa14.2□□□□□ -0.14
CDX1-202ENST00000616154 TMEM61Q8N0U2 210 aa14.2□□□□□ -0.14
CDX1-202ENST00000616154 OR1L6Q8NGR2 347 aa14.2□□□□□ -0.14
CDX1-202ENST00000616154 CLEC3BP05452 202 aa14.19□□□□□ -0.14
CDX1-202ENST00000616154 FAM106AQ4KMX7 169 aa14.19□□□□□ -0.14
CDX1-202ENST00000616154 H2BFWTQ7Z2G1 175 aa14.19□□□□□ -0.14
CDX1-202ENST00000616154 ZNF114Q8NC26 417 aa14.19□□□□□ -0.14
CDX1-202ENST00000616154 MLXQ9UH92 298 aa14.19□□□□□ -0.14
CDX1-202ENST00000616154 S4R3C0 116 aa14.19□□□□□ -0.14
CDX1-202ENST00000616154 INS-IGF2F8WCM5 200 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 ADAP1O75689 374 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 SULT1A3P0DMM9 295 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 SULT1A4P0DMN0 295 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 AKR1C2P52895 323 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 RRAS2P62070 204 aaPredicted RBP14.18□□□□□ -0.14
CDX1-202ENST00000616154 PRCDQ00LT1 54 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 GGNBP1Q5YKI7 109 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 Q6ZRM9 215 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 OR2C3Q8N628 320 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 OR1P1Q8NH06 330 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 GPR146Q96CH1 333 aa14.18□□□□□ -0.14
CDX1-202ENST00000616154 RRNAD1Q96FB5 475 aaKnown RBP14.18□□□□□ -0.14
CDX1-202ENST00000616154 ZNF436Q9C0F3 470 aaPredicted RBP14.18□□□□□ -0.14
CDX1-202ENST00000616154 A0A1B0GU03 582 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 ZNF320A2RRD8 509 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 F8W735 103 aaPredicted RBP14.17□□□□□ -0.14
CDX1-202ENST00000616154 K7EIM0 57 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 PITX3O75364 302 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 HOXB5P09067 269 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 HSPE1P61604 102 aaKnown RBP14.17□□□□□ -0.14
CDX1-202ENST00000616154 UXS1Q8NBZ7 420 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 OR4A16Q8NH70 328 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 SELENOKQ9Y6D0 94 aa14.17□□□□□ -0.14
CDX1-202ENST00000616154 MPTX1A8MV57 137 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 TGOLN2O43493 480 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 SSNA1O43805 119 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 C8orf88P0DMB2 117 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 GPR183P32249 361 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 ELLP55199 621 aaPredicted RBP14.16□□□□□ -0.14
CDX1-202ENST00000616154 SPSB3Q6PJ21 355 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 CHAC2Q8WUX2 184 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 BSCL2Q96G97 398 aaPredicted RBP14.16□□□□□ -0.14
CDX1-202ENST00000616154 GGTLC1Q9BX51 225 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 HINT2Q9BX68 163 aa14.16□□□□□ -0.14
CDX1-202ENST00000616154 A0A1B0GVG6 124 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 IFNA21P01568 189 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 FCGR2BP31994 310 aaPredicted RBP14.15□□□□□ -0.14
CDX1-202ENST00000616154 IL15RAQ13261 267 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 FCN2Q15485 313 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 IZUMO4Q1ZYL8 232 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 SLC25A24Q6NUK1 477 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 UNQ9165/PRO28630Q6UXU0 137 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 OR11H7Q8NGC8 314 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 SCARB1Q8WTV0 552 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 MARC2Q969Z3 335 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 OR10C1Q96KK4 312 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 MED28Q9H204 178 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 C21orf62Q9NYP8 219 aa14.15□□□□□ -0.14
CDX1-202ENST00000616154 TRAV25A0A0B4J276 109 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 SCAF4O95104 1147 aaKnown RBP14.15□□□□□ -0.15
CDX1-202ENST00000616154 H2BFSP57053 126 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 SMCO1Q147U7 214 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 TM4SF20Q53R12 229 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 PVRIGQ6DKI7 326 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 BTNL8Q6UX41 500 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 TMEM190Q8WZ59 177 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 CACNG5Q9UF02 275 aa14.15□□□□□ -0.15
CDX1-202ENST00000616154 LOC102724200A0A096LPH7 203 aaPredicted RBP14.14□□□□□ -0.15
CDX1-202ENST00000616154 I3L2K1 104 aa14.14□□□□□ -0.15
CDX1-202ENST00000616154 CCSO14618 274 aa14.14□□□□□ -0.15
CDX1-202ENST00000616154 CXCL3P19876 107 aa14.14□□□□□ -0.15
CDX1-202ENST00000616154 RNASE11Q8TAA1 199 aaKnown RBP14.14□□□□□ -0.15
CDX1-202ENST00000616154 OVOL2Q9BRP0 275 aa14.14□□□□□ -0.15
CDX1-202ENST00000616154 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.14□□□□□ -0.15
CDX1-202ENST00000616154 MRPL27Q9P0M9 148 aaKnown RBP14.14□□□□□ -0.15
CDX1-202ENST00000616154 MGAT4CQ9UBM8 478 aa14.14□□□□□ -0.15
CDX1-202ENST00000616154 GOSR2O14653 212 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 ADMP35318 185 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 GSG1LQ6UXU4 331 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 ZBTB8BQ8NAP8 495 aaPredicted RBP14.13□□□□□ -0.15
CDX1-202ENST00000616154 OR4D5Q8NGN0 318 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 OR52E5Q8NH55 327 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 ZNF414Q96IQ9 312 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 C2orf50Q96LR7 162 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 CACFD1Q9UGQ2 172 aa14.13□□□□□ -0.15
CDX1-202ENST00000616154 UFC1Q9Y3C8 167 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms