RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 FFAR4Q5NUL3 377 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 NPCDR1Q9BY65 106 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 C16orf95Q9H693 158 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 TPSG1Q9NRR2 321 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 NDUFA4L2Q9NRX3 87 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 WDR83OSQ9Y284 106 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 NBEAL2Q6ZNJ1 2754 aa8.52□□□□□ -1.05
COL4A1-205ENST00000615732 INS-IGF2F8WCM5 200 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 SOX15O60248 233 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 TSPAN9O75954 239 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 MOSP00540 346 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
COL4A1-205ENST00000615732 CNTFRP26992 372 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 UBE2E1P51965 193 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 HNF4GQ14541 408 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 PEA15Q15121 130 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 MMDQ15546 238 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 SSX2Q16385 188 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 ACOT6Q3I5F7 207 aaPredicted RBP8.51□□□□□ -1.05
COL4A1-205ENST00000615732 C10orf55Q5SWW7 151 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 OR2T10Q8NGZ9 312 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 LYPD6BQ8NI32 183 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 RITA1Q96K30 269 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 SLC35E1Q96K37 410 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 FBXL15Q9H469 300 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 TMEM231Q9H6L2 316 aa8.51□□□□□ -1.05
COL4A1-205ENST00000615732 PRSS46E5RG02 174 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 FNDC10F2Z333 226 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 NBR2O15453 112 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 CRYGBP07316 175 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 SNRNP70P08621 437 aaKnown RBP8.5□□□□□ -1.05
COL4A1-205ENST00000615732 OR13C7P0DN81 318 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 GUK1Q16774 197 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 LDLRAD2Q5SZI1 272 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 CENPVQ7Z7K6 275 aaPredicted RBP8.5□□□□□ -1.05
COL4A1-205ENST00000615732 PPP1R27Q86WC6 154 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 KLHDC1Q8N7A1 406 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 OR10W1Q8NGF6 305 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 OR5R1Q8NH85 324 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 ABHD5Q8WTS1 349 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 SFT2D1Q8WV19 159 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 TMEM170AQ8WVE7 144 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 CFHR4Q92496 578 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 EIF5A2Q9GZV4 153 aaKnown RBP8.5□□□□□ -1.05
COL4A1-205ENST00000615732 NPVFQ9HCQ7 196 aa8.5□□□□□ -1.05
COL4A1-205ENST00000615732 TMEM218A2RU14 115 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 CNIH1O95406 144 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 BRS3P32247 399 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 OPRK1P41145 380 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 HABP2Q14520 560 aaPredicted RBP8.49□□□□□ -1.05
COL4A1-205ENST00000615732 KPRPQ5T749 579 aaPredicted RBP8.49□□□□□ -1.05
COL4A1-205ENST00000615732 SAMD5Q5TGI4 173 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 ACSM6Q6P461 480 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 LCN15Q6UWW0 184 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 OR10G4Q8NGN3 311 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 OR10G9Q8NGN4 311 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 OR10G7Q8NGN6 311 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 RNASEH2CQ8TDP1 164 aaKnown RBP8.49□□□□□ -1.05
COL4A1-205ENST00000615732 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
COL4A1-205ENST00000615732 AJUBAQ96IF1 538 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 SSX3Q99909 188 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 ACTR3CQ9C0K3 210 aaPredicted RBP8.49□□□□□ -1.05
COL4A1-205ENST00000615732 VSIRQ9H7M9 311 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 RPRMQ9NS64 109 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 SLC39A9Q9NUM3 307 aa8.49□□□□□ -1.05
COL4A1-205ENST00000615732 CTXND1A0A1B0GTU2 59 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 MAP1LC3B2A6NCE7 125 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 F8W036 122 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 CYB5BO43169 146 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 IFNA1P01562 189 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 APOC3P02656 99 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 TMEM11P17152 192 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 M6PRP20645 277 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 GPX4P36969 197 aaPredicted RBP8.48□□□□□ -1.05
COL4A1-205ENST00000615732 SRSF3P84103 164 aaKnown RBP8.48□□□□□ -1.05
COL4A1-205ENST00000615732 DEFA5Q01523 94 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 CD69Q07108 199 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 BSXQ3C1V8 233 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 ARSJQ5FYB0 599 aaPredicted RBP8.48□□□□□ -1.05
COL4A1-205ENST00000615732 TEPPQ6URK8 271 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 NPBQ8NG41 125 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 EAF1Q96JC9 268 aaPredicted RBP8.48□□□□□ -1.05
COL4A1-205ENST00000615732 MGST2Q99735 147 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 MAP1LC3BQ9GZQ8 125 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 SLC25A22Q9H936 323 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 TNCP24821 2201 aa8.48□□□□□ -1.05
COL4A1-205ENST00000615732 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 A0A1B0GW64 132 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 IGLC7A0M8Q6 106 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 CGB1A6NKQ9 187 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 NCBP2LA6PVI3 153 aaKnown RBP8.47□□□□□ -1.05
COL4A1-205ENST00000615732 NDUFA3O95167 84 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 REG1AP05451 166 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 FAM106CPP0CH98 169 aa8.47□□□□□ -1.05
COL4A1-205ENST00000615732 CDC34P49427 236 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms