RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 RNF144BQ7Z419 303 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 SGMS2Q8NHU3 365 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 TMEM167AQ8TBQ9 72 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 NCOR1P1Q9H4R4 102 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 PHLDA3Q9Y5J5 127 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 ZNF503-AS2A6NEH8 195 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 H0YJW9 148 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 GGCTO75223 188 aaKnown RBP7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 EIF4E3Q8N5X7 224 aaKnown RBP7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 OR1P1Q8NH06 330 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 RCC1LQ96I51 464 aaKnown RBP7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 PLXNB3Q9ULL4 1909 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 SNCGO76070 127 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 APCSP02743 223 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 LMO1P25800 156 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 CD81P60033 236 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 ZNF383Q8NA42 475 aa7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 KLF2Q9Y5W3 355 aaPredicted RBP7.76□□□□□ -1.17
CLTCL1-208ENST00000615606 UBE2E1P51965 193 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 FAM159AQ6UWV7 190 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 DMRTC2Q8IXT2 367 aaPredicted RBP7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 FER1L5A0AVI2 2057 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 FOXI3A8MTJ6 420 aaPredicted RBP7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 SAA4P35542 130 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 PUSL1Q8N0Z8 303 aaKnown RBP7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 RNF125Q96EQ8 232 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 BEX4Q9NWD9 120 aaPredicted RBP7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 J3QLI3 93 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 PKIAP61925 76 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 BEND2Q8NDZ0 799 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 ITLN2Q8WWU7 325 aaPredicted RBP7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 USF3Q68DE3 2245 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 HEATR5AQ86XA9 2040 aa7.75□□□□□ -1.17
CLTCL1-208ENST00000615606 TRAV14DV4A0A0A6YYC5 116 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 CFPP27918 469 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 CFHR2P36980 270 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 MAP1LC3CQ9BXW4 147 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 TMEM250H0YL14 139 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 SNRNP200O75643 2136 aaKnown RBP7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 CGAP01215 116 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 IGKV3-20P01619 116 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 ZNF25P17030 456 aaPredicted RBP7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 IFITM2Q01629 132 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 TEX36Q5VZQ5 186 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 SLC50A1Q9BRV3 221 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 IGHV3OR16-8A0A075B7F1 116 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 IGHV2-70DA0A0C4DH43 119 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 MT-ND6P03923 174 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 FAM3BP58499 235 aaPredicted RBP7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 PAX8Q06710 450 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 OR4D5Q8NGN0 318 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 LINC00527Q9UJ94 153 aa7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 FBLL1A6NHQ2 334 aaKnown RBP7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 MBNL3Q9NUK0 354 aaKnown RBP7.74□□□□□ -1.17
CLTCL1-208ENST00000615606 NPIPB6E9PJ23 425 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 EIF3GO75821 320 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 TRGC1P0CF51 173 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 MDKP21741 143 aaPredicted RBP7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 NSUN5P1Q3KNT7 163 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 C2orf83Q53S99 150 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 PCNX1Q96RV3 2341 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 PRB1P04280 392 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 CD99P14209 185 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 HERPUD1Q15011 391 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 GCGP01275 180 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 C10orf55Q5SWW7 151 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 IGHV1-69DA0A0B4J2H0 117 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 SHISA9B4DS77 424 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 IGHV1-69P01742 117 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 GATA2P23769 480 aaPredicted RBP7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 LDLRAD2Q5SZI1 272 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 SPSB3Q6PJ21 355 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 C11orf44Q8N8P7 122 aa7.73□□□□□ -1.17
CLTCL1-208ENST00000615606 FHITP49789 147 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 TEX38Q6PEX7 206 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 OR10W1Q8NGF6 305 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 SIGLEC9Q9Y336 463 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 FAM181BA6NEQ2 426 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 OR4C46A6NHA9 309 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 CIDEAO60543 219 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 CMC4P56277 68 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 RSPO1Q2MKA7 263 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 C15orf32Q32M92 178 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 ZNF506Q5JVG8 444 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 VN1R17PQ8TDU5 208 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 PARLQ9H300 379 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 PAM16Q9Y3D7 125 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 DUSP14O95147 198 aaKnown RBP7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 ERVK11-1P61568 191 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 FAM53AQ6NSI3 398 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 MIR17HGQ75NE6 70 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 USMG5Q96IX5 58 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 ADAMTS9Q9P2N4 1935 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 RNF222A6NCQ9 220 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 PEX7O00628 323 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 GRNP28799 593 aaKnown RBP7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 HERVK_113P61574 105 aa7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 RPL24P83731 157 aaKnown RBP7.72□□□□□ -1.17
CLTCL1-208ENST00000615606 LY6G6FQ5SQ64 297 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms