RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 ZNF600Q6ZNG1 722 aa12.69□□□□□ -0.38
CCL3-204ENST00000613922 OR52E5Q8NH55 327 aa12.69□□□□□ -0.38
CCL3-204ENST00000613922 RBPMSQ93062 196 aaKnown RBP12.69□□□□□ -0.38
CCL3-204ENST00000613922 GINS3Q9BRX5 216 aa12.69□□□□□ -0.38
CCL3-204ENST00000613922 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
CCL3-204ENST00000613922 ZFAND3Q9H8U3 227 aa12.69□□□□□ -0.38
CCL3-204ENST00000613922 ENY2Q9NPA8 101 aa12.69□□□□□ -0.38
CCL3-204ENST00000613922 CRYM-AS1A6NIL9 109 aa12.68□□□□□ -0.38
CCL3-204ENST00000613922 GSTZ1O43708 216 aaPredicted RBP12.68□□□□□ -0.38
CCL3-204ENST00000613922 RPL5P46777 297 aaKnown RBP12.68□□□□□ -0.38
CCL3-204ENST00000613922 SPCS3P61009 180 aa12.68□□□□□ -0.38
CCL3-204ENST00000613922 DHODHQ02127 395 aa12.68□□□□□ -0.38
CCL3-204ENST00000613922 SELENOHQ8IZQ5 122 aaKnown RBP12.68□□□□□ -0.38
CCL3-204ENST00000613922 RNASE11Q8TAA1 199 aaKnown RBP12.68□□□□□ -0.38
CCL3-204ENST00000613922 GALNT14Q96FL9 552 aa12.68□□□□□ -0.38
CCL3-204ENST00000613922 FNDC4Q9H6D8 234 aaPredicted RBP12.68□□□□□ -0.38
CCL3-204ENST00000613922 MRPL36Q9P0J6 103 aaKnown RBP12.68□□□□□ -0.38
CCL3-204ENST00000613922 ANKRD20A5PA0PJZ0 165 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 SPRY2O43597 315 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 CLN5O75503 358 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 CD5P06127 495 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 BMI1P35226 326 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 CMC4P56277 68 aaPredicted RBP12.67□□□□□ -0.38
CCL3-204ENST00000613922 OR4X1Q8NH49 305 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 ST8SIA2Q92186 375 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 PRRT1Q99946 306 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 SOSTQ9BQB4 213 aa12.67□□□□□ -0.38
CCL3-204ENST00000613922 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
CCL3-204ENST00000613922 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.67□□□□□ -0.38
CCL3-204ENST00000613922 PUS1Q9Y606 427 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCL3-204ENST00000613922 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 A0A1B0GU03 582 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 APOHP02749 345 aaPredicted RBP12.66□□□□□ -0.38
CCL3-204ENST00000613922 DEFB135Q30KP9 77 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 TCF24Q7RTU0 167 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 APRG1Q8IVJ8 170 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 STPG3Q8N7X2 389 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 OR51S1Q8NGJ8 323 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 GPR146Q96CH1 333 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 RNF183Q96D59 192 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 C6orf62Q9GZU0 229 aaPredicted RBP12.66□□□□□ -0.38
CCL3-204ENST00000613922 MAP6D1Q9H9H5 199 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 RSL24D1Q9UHA3 163 aaKnown RBP12.66□□□□□ -0.38
CCL3-204ENST00000613922 TMEM56-RWDD3S4R434 201 aa12.66□□□□□ -0.38
CCL3-204ENST00000613922 H3BMQ9 156 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 RPL35AP18077 110 aaKnown RBP12.65□□□□□ -0.38
CCL3-204ENST00000613922 OPRK1P41145 380 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 HTR2BP41595 481 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 TNFRSF9Q07011 255 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 MLANAQ16655 118 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 TMEM268Q5VZI3 342 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 LILRB2Q8N423 598 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 CACNG5Q9UF02 275 aa12.65□□□□□ -0.38
CCL3-204ENST00000613922 AGRNO00468 2067 aa12.65□□□□□ -0.39
CCL3-204ENST00000613922 EPPK1P58107 5090 aaKnown RBP12.64□□□□□ -0.39
CCL3-204ENST00000613922 IGKV3-7A0A075B6H7 116 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 TRAV2A0A0B4J234 112 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 JTBO76095 146 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 TFPI2P48307 235 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 PAFAH1B2P68402 229 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 TMEM187Q14656 261 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 ZNF124Q15973 351 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 LYG2Q86SG7 212 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 GBGT1Q8N5D6 347 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 IL22RA2Q969J5 263 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 TMEM230Q96A57 120 aa12.64□□□□□ -0.39
CCL3-204ENST00000613922 A0A0J9YWU9 116 aa12.63□□□□□ -0.39
CCL3-204ENST00000613922 IGKV1-17P01599 117 aa12.63□□□□□ -0.39
CCL3-204ENST00000613922 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
CCL3-204ENST00000613922 TNFSF8P32971 234 aa12.63□□□□□ -0.39
CCL3-204ENST00000613922 SCGB3A2Q96PL1 93 aa12.63□□□□□ -0.39
CCL3-204ENST00000613922 SCP2D1Q9UJQ7 156 aa12.63□□□□□ -0.39
CCL3-204ENST00000613922 TRAV30A0A087WSZ9 112 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 RPS10-NUDT3A0A1W2PQS6 291 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 NOL3O60936 208 aaKnown RBP12.62□□□□□ -0.39
CCL3-204ENST00000613922 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 DFFBO76075 338 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 CRYBB3P26998 211 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCL3-204ENST00000613922 RNASEH2CQ8TDP1 164 aaKnown RBP12.62□□□□□ -0.39
CCL3-204ENST00000613922 CSTL1Q9H114 145 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 MS4A6AQ9H2W1 248 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 TMEM231Q9H6L2 316 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
CCL3-204ENST00000613922 CACFD1Q9UGQ2 172 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 KCNIP3Q9Y2W7 256 aa12.62□□□□□ -0.39
CCL3-204ENST00000613922 IGHV3-66A0A0C4DH42 116 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 A0A1W2PS18 150 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 FABP12A6NFH5 140 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 CEBPZOSA8MTT3 80 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 SULT1A3P0DMM9 295 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 SULT1A4P0DMN0 295 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 NPPCP23582 126 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 TIGITQ495A1 244 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 PRSS54Q6PEW0 395 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 SLC24A4Q8NFF2 622 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
CCL3-204ENST00000613922 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms