RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TBX6O95947 436 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 WDR83OSQ9Y284 106 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 C1QTNF9P0C862 333 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 CMC4P56277 68 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 CFHR1Q03591 330 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 OR5AN1Q8NGI8 311 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 LINC01587Q99440 93 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 MEGF9Q9H1U4 602 aa14.53□□□□□ -0.08
HMGXB3-206ENST00000613459 PAX2Q02962 417 aa14.52□□□□□ -0.08
HMGXB3-206ENST00000613459 IGKV3-20P01619 116 aa14.52□□□□□ -0.08
HMGXB3-206ENST00000613459 ZNF585BQ52M93 769 aa14.52□□□□□ -0.08
HMGXB3-206ENST00000613459 JMJD8Q96S16 334 aa14.52□□□□□ -0.08
HMGXB3-206ENST00000613459 ANKRD36A6QL64 1941 aa14.52□□□□□ -0.08
HMGXB3-206ENST00000613459 OVOL1O14753 267 aa14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 TGFAP01135 160 aa14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 IGHV3-35A0A0C4DH35 117 aa14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 IGKCP01834 107 aa14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 CYSLTR1Q9Y271 337 aa14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 UMODP07911 640 aa14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 RASL11AQ6T310 242 aa14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 ITLN2Q8WWU7 325 aaPredicted RBP14.52□□□□□ -0.09
HMGXB3-206ENST00000613459 IGHV3-66A0A0C4DH42 116 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 TMEM167AQ8TBQ9 72 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 C9orf106Q8NAJ2 232 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 TRAV1-1A0A0B4J248 108 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 IGHV4-39P01824 125 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 DPH3Q96FX2 82 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 CHTOPQ9Y3Y2 248 aaKnown RBP14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 COQ2Q96H96 371 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 HIST1H2BLQ99880 126 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 PRSS22Q9GZN4 317 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 RP1P56715 2156 aa14.51□□□□□ -0.09
HMGXB3-206ENST00000613459 CCDC88CQ9P219 2028 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 TNFSF13O75888 250 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 ERVK11-1P61568 191 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 HIST3H2BBQ8N257 126 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 PSG8Q9UQ74 426 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 RNF182Q8N6D2 247 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 TSKUQ8WUA8 353 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 IGHV3OR16-13A0A075B7E8 117 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 IGHV3-74A0A0B4J1X5 117 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 LYZL4Q96KX0 146 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 RNF5Q99942 180 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 DICER1Q9UPY3 1922 aaKnown RBP14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 MUC21A0A0G2JKD1 596 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 A0A0G2JMM0 328 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 MUC21A0A140T8X8 626 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 A0A1W2PPB8 328 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 A0A1W2PRS3 328 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 KIR3DP1A8MWS1 328 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 SLC25A20O43772 301 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 MUC21Q5SSG8 566 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 IGHV3OR16-10A0A075B7F0 116 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 IGKV1D-13A0A0B4J2D9 117 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 CD5P06127 495 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 IGKV1-13P0DP09 117 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 GNG5P63218 68 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 C7orf69Q9H7B7 122 aa14.5□□□□□ -0.09
HMGXB3-206ENST00000613459 DNAJC13O75165 2243 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 GREB1LQ9C091 1923 aaPredicted RBP14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 TRBV24-1A0A075B6N3 115 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 DUTP33316 252 aaKnown RBP14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 C8orf46Q8TAG6 207 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 A8MWV9 139 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 OR9G9P0C7N8 305 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 KIR3DL3Q8N743 410 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 IGKV1-9A0A0C4DH69 117 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 CSRP1P21291 193 aaKnown RBP14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 OR9G4Q8NGQ1 327 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 SCN10AQ9Y5Y9 1956 aa14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 MRPL52Q86TS9 123 aaKnown RBP14.49□□□□□ -0.09
HMGXB3-206ENST00000613459 OOSP1A8MZH6 123 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 FAM71F2Q6NXP2 309 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 CRYGSP22914 178 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 WFDC1Q9HC57 220 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 TDGF1P13385 188 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 FAM201AQ5SY85 155 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 SAMD5Q5TGI4 173 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 TEX38Q6PEX7 206 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 SLC25A15Q9Y619 301 aa14.48□□□□□ -0.09
HMGXB3-206ENST00000613459 TRGV2A0A075B6R0 118 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 IL18BPO95998 194 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 GATA2P23769 480 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 VDAC2P45880 294 aaPredicted RBP14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 TMEM42Q69YG0 159 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 COLCA1Q6ZS62 124 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 FLVCR1-AS1Q8TAF5 88 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 EFNB3Q15768 340 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 ZNF479Q96JC4 524 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 IGHV3-49A0A0A0MS15 119 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 PLNP26678 52 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 DSCR9P59020 149 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 ZNF236Q9UL36 1845 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 NDUFS8O00217 210 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 RIPPLY3P57055 190 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 GAGE13Q4V321 117 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 TOMM7Q9P0U1 55 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 LY96Q9Y6Y9 160 aa14.47□□□□□ -0.09
HMGXB3-206ENST00000613459 TPRP12270 2363 aaKnown RBP14.46□□□□□ -0.09
HMGXB3-206ENST00000613459 Q5PR19 223 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms