RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 GATA4P43694 442 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 RPL11P62913 178 aaKnown RBP7.24□□□□□ -1.25
PDE6A-204ENST00000613228 FOXL1Q12952 345 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 STPG4Q8N801 248 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 ZNRF1Q8ND25 227 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 DOCK8Q8NF50 2099 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 CCDC88CQ9P219 2028 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 TRAV1-1A0A0B4J248 108 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 PSG9Q00887 426 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 POU2AF1Q16633 256 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 SNRNP40Q96DI7 357 aaKnown RBP7.24□□□□□ -1.25
PDE6A-204ENST00000613228 F11RQ9Y624 299 aaKnown RBP7.24□□□□□ -1.25
PDE6A-204ENST00000613228 A0A0G2JNJ9 132 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 PSMB11A5LHX3 300 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 MFAP4P55083 255 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 ID3Q02535 119 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 KIAA1644Q3SXP7 199 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 TMEM177Q53S58 311 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 OR51G1Q8NGK1 321 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 SSMEM1Q8WWF3 244 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 DPM3Q9P2X0 92 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 Q9UFV3 132 aa7.24□□□□□ -1.25
PDE6A-204ENST00000613228 IGHV2-26A0A0B4J1V2 119 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 OR2T8A6NH00 312 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 H3BRM9 83 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 UPK2O00526 184 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 ZNHIT1O43257 154 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 ADAMTSL5Q6ZMM2 481 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 TMEM116Q8NCL8 245 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 LRRK1Q38SD2 2015 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 MUC21A0A0G2JKD1 596 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 MUC21A0A140T8X8 626 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 C15orf61A6NNL5 157 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 OOSP1A8MZH6 123 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 MUC21Q5SSG8 566 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 TEX45Q8NA69 505 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 HEATR5BQ9P2D3 2071 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 C17orf98A8MV24 154 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 IGLV1-44P01699 117 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 THBDP07204 575 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 REG1BP48304 166 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 CRYBA4P53673 196 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 FOXG1P55316 489 aaPredicted RBP7.23□□□□□ -1.25
PDE6A-204ENST00000613228 TMEM256Q8N2U0 113 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 IL36RNQ9UBH0 155 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 LMO1P25800 156 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 SLC35B1P78383 322 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 ZNF841Q6ZN19 808 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 FAM216BQ8N7L0 139 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 GATAD1Q8WUU5 269 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 TMEM131Q92545 1883 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 C8orf88P0DMB2 117 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 RPL39P5Q59GN2 51 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 ZNF524Q96C55 264 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 IFI27L2Q9H2X8 130 aa7.23□□□□□ -1.25
PDE6A-204ENST00000613228 IGKV1D-13A0A0B4J2D9 117 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 FAM181BA6NEQ2 426 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 IGKV1-13P0DP09 117 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 ID1P41134 155 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 C20orf204Q6ZNR8 217 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 LHFPL4Q7Z7J7 247 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 TTC9CQ8N5M4 171 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 NPCDR1Q9BY65 106 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 TMEM133Q9H2Q1 129 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 A0A1W2PS18 150 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 C9orf118A6NHY6 69 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 C9JQL5 133 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 FAM19A2Q8N3H0 131 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 SPANXDQ9BXN6 97 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 SAA2-SAA4A0A096LPE2 208 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 SAA2P0DJI9 122 aaPredicted RBP7.22□□□□□ -1.25
PDE6A-204ENST00000613228 HGFACQ04756 655 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 TCF23Q7RTU1 214 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 ZNF525Q8N782 197 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 ZNF418Q8TF45 676 aaPredicted RBP7.22□□□□□ -1.25
PDE6A-204ENST00000613228 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.22□□□□□ -1.25
PDE6A-204ENST00000613228 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 CD55P08174 381 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 DUTP33316 252 aaKnown RBP7.22□□□□□ -1.25
PDE6A-204ENST00000613228 CCL20P78556 96 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 SRSF6Q13247 344 aaKnown RBP7.22□□□□□ -1.25
PDE6A-204ENST00000613228 RPRMQ9NS64 109 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 TNFRSF19Q9NS68 423 aa7.22□□□□□ -1.25
PDE6A-204ENST00000613228 FOXA2Q9Y261 457 aaPredicted RBP7.22□□□□□ -1.25
PDE6A-204ENST00000613228 TMEM189A5PLL7 270 aa7.21□□□□□ -1.25
PDE6A-204ENST00000613228 TOMM40O96008 361 aa7.21□□□□□ -1.25
PDE6A-204ENST00000613228 MOSP00540 346 aa7.21□□□□□ -1.25
PDE6A-204ENST00000613228 SSBP2P81877 361 aaPredicted RBP7.21□□□□□ -1.25
PDE6A-204ENST00000613228 IGKV1D-8A0A087WSZ0 117 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 A8MWL6 223 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 M0R1W7 72 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 C1QTNF9P0C862 333 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 ZNF474Q6S9Z5 364 aaPredicted RBP7.21□□□□□ -1.26
PDE6A-204ENST00000613228 STPG3Q8N7X2 389 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 RPUSD1Q9UJJ7 312 aaKnown RBP7.21□□□□□ -1.26
PDE6A-204ENST00000613228 TRAV8-2A0A0B4J237 113 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 FAM231BA6NCW3 169 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 C3orf79P0CE67 100 aa7.21□□□□□ -1.26
PDE6A-204ENST00000613228 COA6Q5JTJ3 125 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms