RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 ID1P41134 155 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 TMEM256Q8N2U0 113 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 PNKDQ8N490 385 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 MBNL3Q9NUK0 354 aaKnown RBP9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 TMEM50AO95807 157 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 RAB37Q96AX2 223 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 LINC00473A8K010 186 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 C17orf100A8MU93 164 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 PYYP10082 97 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 GNG5P63218 68 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 SPATA31B1PQ5VZV4 182 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 UNQ5815/PRO19632Q6UWF5 114 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 RP1L1Q8IWN7 2480 aaPredicted RBP9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 CCL21O00585 134 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 FAM27E3Q08E93 113 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 DLX1P56177 255 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 COQ2Q96H96 371 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 COL4A3Q01955 1670 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 FNDC10F2Z333 226 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 NIT1Q86X76 327 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 ST6GALNAC6Q969X2 333 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 FBXL15Q9H469 300 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 KIAA1671Q9BY89 1806 aa9.03□□□□□ -0.96
CDC42EP3-206ENST00000611976 GFRA3O60609 400 aa9.02□□□□□ -0.96
CDC42EP3-206ENST00000611976 APOBEC3AP31941 199 aaPredicted RBP9.02□□□□□ -0.96
CDC42EP3-206ENST00000611976 CD177Q8N6Q3 437 aa9.02□□□□□ -0.96
CDC42EP3-206ENST00000611976 RPUSD1Q9UJJ7 312 aaKnown RBP9.02□□□□□ -0.96
CDC42EP3-206ENST00000611976 A0A1W2PS18 150 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 SMIM12Q96EX1 92 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 HIST1H4GQ99525 98 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 DCAF16Q9NXF7 216 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 A8MWP6 167 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 NTF4P34130 210 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 RSPO1Q2MKA7 263 aaPredicted RBP9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 LYPD6Q86Y78 171 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 HS3ST6Q96QI5 342 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 UBTD1Q9HAC8 227 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 PHF3Q92576 2039 aaKnown RBP9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 LINC00614P0C842 121 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 ALKBH7Q9BT30 221 aaPredicted RBP9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 F11RQ9Y624 299 aaKnown RBP9.02□□□□□ -0.97
CDC42EP3-206ENST00000611976 NOTCH4Q99466 2003 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 ASXL3Q9C0F0 2248 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 C7orf71A4D174 169 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 CCL3L1P16619 93 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 FAM57AQ8TBR7 257 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 MED12Q93074 2177 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 LOC105371242A0A075B767 164 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 DLEU1O43261 78 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 TYMSP04818 313 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 PVRIGQ6DKI7 326 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 NUDT10Q8NFP7 164 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 NUDT11Q96G61 164 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 PLSCR4Q9NRQ2 329 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 DPM3Q9P2X0 92 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 SNRNP200O75643 2136 aaKnown RBP9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 GPR183P32249 361 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 LOXL3P58215 753 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 BSPH1Q075Z2 132 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 ZNF726P1Q15940 193 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 ZNF502Q8TBZ5 544 aa9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 MRPL27Q9P0M9 148 aaKnown RBP9.01□□□□□ -0.97
CDC42EP3-206ENST00000611976 TRBV20OR9-2A0A075B6H5 130 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 MDS2Q8NDY4 140 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 TRAV3A0A0B4J244 114 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 FOXH1O75593 365 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 GPX1P07203 203 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 METRNQ9UJH8 293 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 PROK2Q9HC23 129 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 PRDM6Q9NQX0 595 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 ATP5LO75964 103 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 CA1P00915 261 aaPredicted RBP9□□□□□ -0.97
CDC42EP3-206ENST00000611976 FBLN7Q53RD9 439 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 PHLDA3Q9Y5J5 127 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 THADAQ6YHU6 1953 aa9□□□□□ -0.97
CDC42EP3-206ENST00000611976 DLX6P56179 175 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 C8orf46Q8TAG6 207 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 SSC4DQ8WTU2 575 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 EEF1AKMT3Q96AZ1 226 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 TMEM133Q9H2Q1 129 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 IGKV3-7A0A075B6H7 116 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 TRAV5A0A0B4J249 113 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 M0R3E3 92 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 IGHV1-46P01743 117 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 HIST1H1AQ02539 215 aaPredicted RBP8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 Q0VG73 95 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 OR10W1Q8NGF6 305 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 OR1N2Q8NGR9 330 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 TNFRSF14Q92956 283 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 LPAR2Q9HBW0 351 aa8.99□□□□□ -0.97
CDC42EP3-206ENST00000611976 C21orf62Q9NYP8 219 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms