RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CORTO00230 105 aa12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 CD69Q07108 199 aa12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 SPATA12Q7Z6I5 190 aa12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 KIR3DL3Q8N743 410 aa12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 COMMD5Q9GZQ3 224 aa12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 MRPL27Q9P0M9 148 aaKnown RBP12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 AMMECR1Q9Y4X0 333 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 DCHS1Q96JQ0 3298 aa12.28□□□□□ -0.44
PCDHGB1-202ENST00000611598 FAM181BA6NEQ2 426 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 E7EUB6 86 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 HSBP1O75506 76 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 KLHDC1Q8N7A1 406 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 NUDT10Q8NFP7 164 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 NUDT11Q96G61 164 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 TANC2Q9HCD6 1990 aa12.27□□□□□ -0.44
PCDHGB1-202ENST00000611598 VWC2LB2RUY7 222 aa12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 M0R2Z0 102 aa12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 PCP4P48539 62 aa12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 CAMPP49913 170 aa12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 RNASEKQ6P5S7 137 aaKnown RBP12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 SGK494Q96LW2 274 aa12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 C19orf24Q9BVV8 132 aa12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 TNFRSF19Q9NS68 423 aa12.27□□□□□ -0.45
PCDHGB1-202ENST00000611598 C20orf202A1L168 122 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 ZNF883P0CG24 379 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 GNG5P63218 68 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 SRSF6Q13247 344 aaKnown RBP12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 RTL8BQ17RB0 113 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 FAM216BQ8N7L0 139 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 WIPF2Q8TF74 440 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 NAV3Q8IVL0 2385 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 PLAUP00749 431 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 CD59P13987 128 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 ZNF841Q6ZN19 808 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 BHLHA15Q7RTS1 189 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 ZNF329Q86UD4 541 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 CCL13Q99616 98 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 SLC25A15Q9Y619 301 aa12.26□□□□□ -0.45
PCDHGB1-202ENST00000611598 PEX7O00628 323 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 IGLL1P15814 213 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 PTTG1IPP53801 180 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 TBR1Q16650 682 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 PATE2Q6UY27 113 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 ALKBH7Q9BT30 221 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 MRPL32Q9BYC8 188 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 PLSCR4Q9NRQ2 329 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 CLEC5AQ9NY25 188 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 RAI1Q7Z5J4 1906 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 TTC28Q96AY4 2481 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 SH2D7A6NKC9 451 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 M0R1B8 84 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 CD24P25063 80 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 CCL11P51671 97 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 HES3Q5TGS1 186 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 RNASE8Q8TDE3 154 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 ORAOV1Q8WV07 137 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 IGHV2-26A0A0B4J1V2 119 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 C2orf70A6NJV1 201 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 PRR33A8MZF0 331 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 M0QZ24 198 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 SLC25A48Q6ZT89 311 aaKnown RBP12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 FDCSPQ8NFU4 85 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 OR8B3Q8NGG8 313 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 OR5B3Q8NH48 314 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 GRAMD2BQ96HH9 432 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 GAFA1Q96PS6 74 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 OR8B2Q96RD0 313 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 PAXXQ9BUH6 204 aa12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 FNDC4Q9H6D8 234 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB1-202ENST00000611598 PLCE1Q9P212 2302 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 TRAV9-2A0A087WT02 112 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 COX7A2P2O60397 106 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 KLF3P57682 345 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 C10orf55Q5SWW7 151 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 FAM231DQ6ZW35 169 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 URB1-AS1Q96HZ7 61 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 MRPL20Q9BYC9 149 aaKnown RBP12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 SAP30LQ9HAJ7 183 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 MRPS16Q9Y3D3 137 aaKnown RBP12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 WT1P19544 449 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 UBE2G1P62253 170 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 KLF5Q13887 457 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 RASL11AQ6T310 242 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 OR4F17Q8NGA8 305 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 ST6GALNAC6Q969X2 333 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 ZNF714Q96N38 554 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 C7orf69Q9H7B7 122 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 BET1LQ9NYM9 111 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 MRPL36Q9P0J6 103 aaKnown RBP12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 DKK4Q9UBT3 224 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 PROCRQ9UNN8 238 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
PCDHGB1-202ENST00000611598 H0YJW9 148 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms