RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ARL5BQ96KC2 179 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 OR5AC2Q9NZP5 309 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 TMEM56-RWDD3S4R434 201 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 RIC1Q4ADV7 1423 aa0.77□□□□□ -2.29
RNU6-88P-201ENST00000606801 KIF1BO60333 1816 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 TAF1LQ8IZX4 1826 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 TRAV26-2A0A0B4J265 109 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 PQLC2LA1A4F0 135 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 OR4C46A6NHA9 309 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 M0R036 132 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 SERPINA6P08185 405 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 CCDC122Q5T0U0 273 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 PTRHD1Q6GMV3 140 aaKnown RBP0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 SIGLECL1Q8N7X8 197 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 OR8J2Q8NGG1 315 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 OR5A1Q8NGJ0 315 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 C8orf76Q96K31 380 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 ERGIC3Q9Y282 383 aa0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 ZFC3H1O60293 1989 aaKnown RBP0.76□□□□□ -2.29
RNU6-88P-201ENST00000606801 TRAV9-1A0A075B6T8 112 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 FUOMA2VDF0 154 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 COX6A1P12074 109 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 PDE6HQ13956 83 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 FAM19A2Q8N3H0 131 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 LINC00311Q8N616 119 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 DNAJC9Q8WXX5 260 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 OBSCN-AS1Q96MR7 158 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 GINS4Q9BRT9 223 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 TMEM147Q9BVK8 224 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 COMMD5Q9GZQ3 224 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 VPS29Q9UBQ0 182 aa0.75□□□□□ -2.29
RNU6-88P-201ENST00000606801 KIAA1549Q9HCM3 1950 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 CNTRLQ7Z7A1 2325 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 LOC110117498A0A087WWA1 95 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 KPNA3O00505 521 aaPredicted RBP0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 OR1I1O60431 355 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 CNIH1O95406 144 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 TTRP02766 147 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 SMIM10L2AP0DMW4 78 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 SMIM10L2BP0DMW5 78 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 MIFP14174 115 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 SSR2P43308 183 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 LSM6P62312 80 aaKnown RBP0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 RANP62826 216 aaKnown RBP0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 RHEBQ15382 184 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 KHDC3LQ587J8 217 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 SPOPLQ6IQ16 392 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 HIST3H2BBQ8N257 126 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 C12orf45Q8N5I9 185 aaPredicted RBP0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 C20orf27Q9GZN8 174 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 PARVGQ9HBI0 331 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 SNURFQ9Y675 71 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 ALPK3Q96L96 1907 aa0.74□□□□□ -2.29
RNU6-88P-201ENST00000606801 PLB1Q6P1J6 1458 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 ZFYVE9O95405 1425 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 ARHGEF28Q8N1W1 1705 aaKnown RBP0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 CHD3Q12873 2000 aaKnown RBP0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 A0A087WUJ7 227 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 A0A0D9SG52 128 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 IFNA10P01566 189 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 BRS3P32247 399 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 CDK10Q15131 360 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 DEFB115Q30KQ5 88 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 OR4E2Q8NGC2 313 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 SLC39A9Q9NUM3 307 aa0.73□□□□□ -2.29
RNU6-88P-201ENST00000606801 PIK3C2GO75747 1445 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 UNC13CQ8NB66 2214 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 ADGRB2O60241 1585 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 MED1Q15648 1581 aaPredicted RBP0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 A0A087WX48 190 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 LYZL6O75951 148 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 CRYZL1O95825 349 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 RPS17P08708 135 aaKnown RBP0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 ZNF93P35789 620 aaPredicted RBP0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 LINC01554Q52M75 96 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 RNASE10Q5GAN6 216 aaKnown RBP0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 SPANXN5Q5MJ07 72 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 DCUN1D1Q96GG9 259 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 CCDC42Q96M95 316 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 ULBP3Q9BZM4 244 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 DCSTAMPQ9H295 470 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 MIXL1Q9H2W2 232 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 MYO18AQ92614 2054 aaKnown RBP0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 ASCC3Q8N3C0 2202 aaKnown RBP0.72□□□□□ -2.29
RNU6-88P-201ENST00000606801 TRBV6-7A0A0A0MS04 114 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 SMIM9A6NGZ8 99 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 GOLGA6L19H0YKK7 550 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 ZNF682O95780 498 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 TCRBP04435 133 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 MYL6P60660 151 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 AESQ08117 197 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 DEFB113Q30KQ7 82 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 C12orf74Q32Q52 190 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 DPPA3Q6W0C5 159 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 PHF13Q86YI8 300 aaPredicted RBP0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 TRAPPC5Q8IUR0 188 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 LINC00471Q8N535 108 aa0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 ZNF418Q8TF45 676 aaPredicted RBP0.71□□□□□ -2.3
RNU6-88P-201ENST00000606801 ADAT3Q96EY9 351 aaPredicted RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms