RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 MRGPRG-AS1Q2M3A8 158 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 TRBV23-1A0A0A0MS06 115 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 LIPFP07098 398 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 RPL27AP46776 148 aaKnown RBP12.75□□□□□ -0.37
CTSA-214ENST00000606788 TMEM30BQ3MIR4 351 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 NANPQ8TBE9 248 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 LINC00479Q96M42 142 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 SLC17A3O00476 420 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 OR4X1Q8NH49 305 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
CTSA-214ENST00000606788 IGHV3OR16-10A0A075B7F0 116 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 ZNF98A6NK75 572 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BKO60814 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BJP06899 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BOP23527 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BBP33778 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BDP58876 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BCP62807 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST2H2BEQ16778 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.74□□□□□ -0.37
CTSA-214ENST00000606788 LINC01551Q86U37 167 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 C1QL4Q86Z23 238 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 LINC00311Q8N616 119 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 OR1B1Q8NGR6 318 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 BLNKQ8WV28 456 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BHQ93079 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BNQ99877 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 HIST1H2BMQ99879 126 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 SSBP3Q9BWW4 388 aaPredicted RBP12.74□□□□□ -0.37
CTSA-214ENST00000606788 SIGLEC9Q9Y336 463 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 TRGC1P0CF51 173 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 RD3LP0DJH9 198 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 OCC1Q8TAD7 63 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 OR5B12Q96R08 314 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 FUT9Q9Y231 359 aa12.74□□□□□ -0.37
CTSA-214ENST00000606788 IGLC7A0M8Q6 106 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 MC5RP33032 325 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 COX7A2P2O60397 106 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 GPR6P46095 362 aaPredicted RBP12.73□□□□□ -0.37
CTSA-214ENST00000606788 PPP1R27Q86WC6 154 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 MIOXQ9UGB7 285 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
CTSA-214ENST00000606788 AP4M1O00189 453 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 LY86O95711 162 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 SLC35B1P78383 322 aa12.73□□□□□ -0.37
CTSA-214ENST00000606788 A0A1W2PN81 502 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 B4DEV8 164 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 UBE2L3P68036 154 aaKnown RBP12.72□□□□□ -0.37
CTSA-214ENST00000606788 DYNAPQ8N1N2 210 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 DOPEY1Q5JWR5 2465 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 TRAV34A0A0B4J273 112 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 F6UZH7 168 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 KCNIP2Q9NS61 270 aa12.72□□□□□ -0.37
CTSA-214ENST00000606788 A0A087X0M5 115 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 A0A1B0GX30 115 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 SH2D7A6NKC9 451 aaPredicted RBP12.71□□□□□ -0.37
CTSA-214ENST00000606788 PDE6DO43924 150 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 CLN5O75503 358 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 HTR1DP28221 377 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 C11orf71Q6IPW1 123 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 SRSF12Q8WXF0 261 aaKnown RBP12.71□□□□□ -0.37
CTSA-214ENST00000606788 GPR61Q9BZJ8 451 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 ZANQ9Y493 2812 aa12.71□□□□□ -0.37
CTSA-214ENST00000606788 IGHV3-23P01764 117 aa12.71□□□□□ -0.38
CTSA-214ENST00000606788 FXYD3Q14802 87 aa12.71□□□□□ -0.38
CTSA-214ENST00000606788 PRORYQ9H606 182 aa12.71□□□□□ -0.38
CTSA-214ENST00000606788 TLN2Q9Y4G6 2542 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 GGTLC3B5MD39 225 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 MT-CO2P00403 227 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 LGALS7P47929 136 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 ITLN2Q8WWU7 325 aaPredicted RBP12.7□□□□□ -0.38
CTSA-214ENST00000606788 TNFRSF19Q9NS68 423 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 IGKV1D-37A0A075B6S9 117 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 RBP4P02753 201 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 MGST1P10620 155 aaKnown RBP12.7□□□□□ -0.38
CTSA-214ENST00000606788 S100PP25815 95 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 MEOX2P50222 304 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 SUB1P53999 127 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTSA-214ENST00000606788 RANP62826 216 aaKnown RBP12.7□□□□□ -0.38
CTSA-214ENST00000606788 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 PQLC2Q6ZP29 291 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 MMD2Q8IY49 270 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 DMRT1Q9Y5R6 373 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 IGHV3OR16-8A0A075B7F1 116 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 PRB1P04280 392 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 PFN1P07737 140 aaKnown RBP12.7□□□□□ -0.38
CTSA-214ENST00000606788 ZNF137PP52743 207 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 TCL1AP56279 114 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 VMO1Q7Z5L0 202 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 ZNF596Q8TC21 504 aa12.7□□□□□ -0.38
CTSA-214ENST00000606788 BPESC1Q9GZL8 116 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms