RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 FNDC4Q9H6D8 234 aaPredicted RBP5.59□□□□□ -1.51
CUX1-219ENST00000606749 MRPL36Q9P0J6 103 aaKnown RBP5.59□□□□□ -1.51
CUX1-219ENST00000606749 COPZ2Q9P299 210 aa5.59□□□□□ -1.51
CUX1-219ENST00000606749 KLK5Q9Y337 293 aaPredicted RBP5.59□□□□□ -1.51
CUX1-219ENST00000606749 TRAV2A0A0B4J234 112 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 GABARAPH6UMI1 98 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 CORTO00230 105 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 CTDSP2O14595 271 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 CLN5O75503 358 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 B3GALNT1O75752 331 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 CDS2O95674 445 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 RAB3DO95716 219 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 SMIM18P0DKX4 95 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 CRYBB3P26998 211 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 TAS2R19P59542 299 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 DEFB131AP59861 70 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 SPCS3P61009 180 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 RPL11P62913 178 aaKnown RBP5.58□□□□□ -1.52
CUX1-219ENST00000606749 BSXQ3C1V8 233 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 SCGB2B2Q4G0G5 96 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 GPR107Q5VW38 600 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 LEMD1Q68G75 181 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 STEAP1BQ6NZ63 245 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 FAM24BQ8N5W8 94 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 CCDC71LQ8N9Z2 235 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 OR11H2Q8NH07 326 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 MARCH1Q8TCQ1 289 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 GLYATL2Q8WU03 294 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 RRNAD1Q96FB5 475 aaKnown RBP5.58□□□□□ -1.52
CUX1-219ENST00000606749 RTBDNQ9BSG5 229 aaPredicted RBP5.58□□□□□ -1.52
CUX1-219ENST00000606749 PDCD10Q9BUL8 212 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 MIXL1Q9H2W2 232 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 ENY2Q9NPA8 101 aa5.58□□□□□ -1.52
CUX1-219ENST00000606749 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.58□□□□□ -1.52
CUX1-219ENST00000606749 TEX13DA0A0J9YY54 714 aaPredicted RBP5.57□□□□□ -1.52
CUX1-219ENST00000606749 A0A1W2PS18 150 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 RGS5O15539 181 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 CA1P00915 261 aaPredicted RBP5.57□□□□□ -1.52
CUX1-219ENST00000606749 IGKV1-17P01599 117 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 OR5AC1P0C628 307 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 OPRK1P41145 380 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 HOXA1P49639 335 aaPredicted RBP5.57□□□□□ -1.52
CUX1-219ENST00000606749 SSBP1Q04837 148 aaKnown RBP5.57□□□□□ -1.52
CUX1-219ENST00000606749 AARDQ4LEZ3 155 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 FAAP20Q6NZ36 180 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 FAM219AQ8IW50 185 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 OR52E5Q8NH55 327 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 RNASE11Q8TAA1 199 aaKnown RBP5.57□□□□□ -1.52
CUX1-219ENST00000606749 LHFPL5Q8TAF8 219 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 TMEM230Q96A57 120 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 GPR146Q96CH1 333 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 METTL26Q96S19 204 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 TMEM222Q9H0R3 208 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 TMEM231Q9H6L2 316 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 RABAC1Q9UI14 185 aa5.57□□□□□ -1.52
CUX1-219ENST00000606749 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
CUX1-219ENST00000606749 TRAV30A0A087WSZ9 112 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 K7EQG2 157 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 DEFB4AO15263 64 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 GIG44P09565 113 aaPredicted RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 HTR2BP41595 481 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 P2RY1P47900 373 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 ALDH3B2P48448 385 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 NANOS2P60321 138 aaKnown RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 MRPS10P82664 201 aaKnown RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 DHODHQ02127 395 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 TMEM187Q14656 261 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 MEF2DQ14814 521 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 SPCS2Q15005 226 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 RBMS2Q15434 407 aaKnown RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 TIGITQ495A1 244 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 C2orf83Q53S99 150 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 LGALS9CQ6DKI2 356 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 STHQ8IWL8 128 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 SELENOHQ8IZQ5 122 aaKnown RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 C11orf45Q8TAV5 145 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 DCANP1Q8TF63 244 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 RBPMSQ93062 196 aaKnown RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 C11orf68Q9H3H3 251 aaKnown RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 NAA60Q9H7X0 242 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 GPR132Q9UNW8 380 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 C14orf166Q9Y224 244 aaKnown RBP5.56□□□□□ -1.52
CUX1-219ENST00000606749 U3KQE9 123 aa5.56□□□□□ -1.52
CUX1-219ENST00000606749 RPS10-NUDT3A0A1W2PQS6 291 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 CRYM-AS1A6NIL9 109 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 DISC1C4P0D8 188 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 CTDSPLO15194 276 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 SCGB2A1O75556 95 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 IFNA4P05014 189 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 AKAIN1P0CW23 69 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 YPEL3P61236 119 aaPredicted RBP5.55□□□□□ -1.52
CUX1-219ENST00000606749 SURF2Q15527 256 aaPredicted RBP5.55□□□□□ -1.52
CUX1-219ENST00000606749 TMEM268Q5VZI3 342 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 PRSS54Q6PEW0 395 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 GPR141Q7Z602 305 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 TRPT1Q86TN4 253 aaKnown RBP5.55□□□□□ -1.52
CUX1-219ENST00000606749 RPP25LQ8N5L8 163 aaKnown RBP5.55□□□□□ -1.52
CUX1-219ENST00000606749 STXBP6Q8NFX7 210 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 OR4C16Q8NGL9 310 aa5.55□□□□□ -1.52
CUX1-219ENST00000606749 RNASEH2CQ8TDP1 164 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms