RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 RBM38Q9H0Z9 239 aaKnown RBP13.51□□□□□ -0.25
CCDC12-213ENST00000605875 V9GYH0 126 aa13.51□□□□□ -0.25
CCDC12-213ENST00000605875 IGHV7-4-1A0A0J9YVY3 117 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 CXorf65A6NEN9 183 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 K7EMT4 169 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 NXPH3O95157 252 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 PYDC2Q56P42 97 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 LAMTOR1Q6IAA8 161 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 DUSP18Q8NEJ0 188 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 GPR146Q96CH1 333 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 OR10C1Q96KK4 312 aa13.5□□□□□ -0.25
CCDC12-213ENST00000605875 IGHV3OR16-13A0A075B7E8 117 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 IGHV3-74A0A0B4J1X5 117 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 CORTO00230 105 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 OPRK1P41145 380 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 NPBWR1P48145 328 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 SUB1P53999 127 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC12-213ENST00000605875 SPCS3P61009 180 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 KLF9Q13886 244 aaPredicted RBP13.49□□□□□ -0.25
CCDC12-213ENST00000605875 ODF3L2Q3SX64 289 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 AARDQ4LEZ3 155 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 PVRIGQ6DKI7 326 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 TMEM116Q8NCL8 245 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 RNF2Q99496 336 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.49□□□□□ -0.25
CCDC12-213ENST00000605875 MRPL36Q9P0J6 103 aaKnown RBP13.49□□□□□ -0.25
CCDC12-213ENST00000605875 SMPXQ9UHP9 88 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 TMEM56-RWDD3S4R434 201 aa13.49□□□□□ -0.25
CCDC12-213ENST00000605875 A0A0J9YWU9 116 aa13.48□□□□□ -0.25
CCDC12-213ENST00000605875 CHEK1O14757 476 aa13.48□□□□□ -0.25
CCDC12-213ENST00000605875 AKR1C4P17516 323 aa13.48□□□□□ -0.25
CCDC12-213ENST00000605875 TMEM187Q14656 261 aa13.48□□□□□ -0.25
CCDC12-213ENST00000605875 BSXQ3C1V8 233 aa13.48□□□□□ -0.25
CCDC12-213ENST00000605875 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
CCDC12-213ENST00000605875 FNDC4Q9H6D8 234 aaPredicted RBP13.48□□□□□ -0.25
CCDC12-213ENST00000605875 NUPR2A6NF83 97 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 OR4C46A6NHA9 309 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 FAUP35544 74 aaKnown RBP13.47□□□□□ -0.25
CCDC12-213ENST00000605875 ZNF79Q15937 498 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 TOMM20LQ6UXN7 152 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 ZNF600Q6ZNG1 722 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 WFDC3Q8IUB2 231 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 IL22RA2Q969J5 263 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 GALNT14Q96FL9 552 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 SCGB3A2Q96PL1 93 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 GINS3Q9BRX5 216 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 ZFAND3Q9H8U3 227 aa13.47□□□□□ -0.25
CCDC12-213ENST00000605875 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
CCDC12-213ENST00000605875 PUS1Q9Y606 427 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC12-213ENST00000605875 IGKV3-7A0A075B6H7 116 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 TRAV14DV4A0A0A6YYC5 116 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 CEBPZOSA8MTT3 80 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 SPRY2O43597 315 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 S100A5P33763 92 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 AP3S2P59780 193 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 SUPT4H1P63272 117 aaKnown RBP13.46□□□□□ -0.25
CCDC12-213ENST00000605875 EWSR1Q01844 656 aaKnown RBP eCLIP13.46□□□□□ -0.255e-7■■■■□ 25.4
CCDC12-213ENST00000605875 TNFRSF9Q07011 255 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 LYG2Q86SG7 212 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 TOMM5Q8N4H5 51 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 TP53TG1Q9Y2A0 90 aa13.46□□□□□ -0.25
CCDC12-213ENST00000605875 A0A1B0GU03 582 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 SULT1A3P0DMM9 295 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 SULT1A4P0DMN0 295 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 BMI1P35226 326 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 HTR2BP41595 481 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 TFPI2P48307 235 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 APOC4P55056 127 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
CCDC12-213ENST00000605875 Q6ZWC4 215 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 TMED4Q7Z7H5 227 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 CCDC190Q86UF4 302 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 SLC24A4Q8NFF2 622 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 ST8SIA2Q92186 375 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 KCNIP3Q9Y2W7 256 aa13.45□□□□□ -0.26
CCDC12-213ENST00000605875 IGHV3-66A0A0C4DH42 116 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 CLN5O75503 358 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 TMEM50AO95807 157 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 MLANAQ16655 118 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 DEFB135Q30KP9 77 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 NMSQ5H8A3 153 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 LYZL2Q7Z4W2 148 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 OR4X1Q8NH49 305 aa13.44□□□□□ -0.26
CCDC12-213ENST00000605875 A0A0B4J2A0 478 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 RPS10-NUDT3A0A1W2PQS6 291 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 UBE2CO00762 179 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 SCGB2A1O75556 95 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 APOHP02749 345 aaPredicted RBP13.43□□□□□ -0.26
CCDC12-213ENST00000605875 ANXA3P12429 323 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 TIGITQ495A1 244 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 C2orf83Q53S99 150 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 GBGT1Q8N5D6 347 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 TMEM170AQ8WVE7 144 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 SHPKQ9UHJ6 478 aa13.43□□□□□ -0.26
CCDC12-213ENST00000605875 KLK5Q9Y337 293 aaPredicted RBP13.43□□□□□ -0.26
CCDC12-213ENST00000605875 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
CCDC12-213ENST00000605875 NPY1RP25929 384 aa13.42□□□□□ -0.26
CCDC12-213ENST00000605875 RND2P52198 227 aa13.42□□□□□ -0.26
CCDC12-213ENST00000605875 SRPXP78539 464 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms