RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
CCDC12-212ENST00000605358 HLA-DMBP28068 263 aa12.9□□□□□ -0.34
CCDC12-212ENST00000605358 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
CCDC12-212ENST00000605358 PDCD10Q9BUL8 212 aa12.9□□□□□ -0.34
CCDC12-212ENST00000605358 AGRNO00468 2067 aa12.89□□□□□ -0.35
CCDC12-212ENST00000605358 ATP6V1G2O95670 118 aa12.89□□□□□ -0.35
CCDC12-212ENST00000605358 IFNA17P01571 189 aa12.89□□□□□ -0.35
CCDC12-212ENST00000605358 P0C879 139 aa12.89□□□□□ -0.35
CCDC12-212ENST00000605358 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-212ENST00000605358 FAM24BQ8N5W8 94 aa12.89□□□□□ -0.35
CCDC12-212ENST00000605358 PCLOQ9Y6V0 5065 aa12.89□□□□□ -0.35
CCDC12-212ENST00000605358 A0A0B4J293 547 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 IGHV3-66A0A0C4DH42 116 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 HELTA6NFD8 242 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 B3GALNT1O75752 331 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 RNASE2P10153 161 aaKnown RBP12.88□□□□□ -0.35
CCDC12-212ENST00000605358 P2RY1P47900 373 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 STXBP6Q8NFX7 210 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 DCANP1Q8TF63 244 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 TMEM230Q96A57 120 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 SEPSECSQ9HD40 501 aaKnown RBP12.88□□□□□ -0.35
CCDC12-212ENST00000605358 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 TBC1D24Q9ULP9 559 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 X6R8D5 127 aa12.88□□□□□ -0.35
CCDC12-212ENST00000605358 IGHV4-4A0A075B6R2 117 aa12.87□□□□□ -0.35
CCDC12-212ENST00000605358 IGKV1-5P01602 117 aa12.87□□□□□ -0.35
CCDC12-212ENST00000605358 AKR1C2P52895 323 aa12.87□□□□□ -0.35
CCDC12-212ENST00000605358 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
CCDC12-212ENST00000605358 ARRDC1Q8N5I2 433 aa12.87□□□□□ -0.35
CCDC12-212ENST00000605358 CSNK1G2-AS1Q8NCQ2 148 aa12.87□□□□□ -0.35
CCDC12-212ENST00000605358 RPS10-NUDT3A0A1W2PQS6 291 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 TBPP20226 339 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 OPRK1P41145 380 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 BSXQ3C1V8 233 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 Q6ZTC4 211 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 VCX3AQ9NNX9 186 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 U3KQE9 123 aa12.86□□□□□ -0.35
CCDC12-212ENST00000605358 KIAA1109Q2LD37 5005 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 ELOA3CA0A087WX78 387 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-212ENST00000605358 C3orf85A0A1B0GTC6 90 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 AMBPP02760 352 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 ZNF688P0C7X2 276 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 P0DMU3 169 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 FAM231AP0DMU4 169 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 FAM231CP0DMU5 169 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 PGAM2P15259 253 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 TGFBR1P36897 503 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 HOXA1P49639 335 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-212ENST00000605358 PIGPP57054 158 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 AARDQ4LEZ3 155 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 LHFPL1Q86WI0 220 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 FAM219AQ8IW50 185 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 RRNAD1Q96FB5 475 aaKnown RBP12.85□□□□□ -0.35
CCDC12-212ENST00000605358 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-212ENST00000605358 COMMD3Q9UBI1 195 aa12.85□□□□□ -0.35
CCDC12-212ENST00000605358 IGKV1-17P01599 117 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 C4BPBP20851 252 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 NPY1RP25929 384 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 ETV6P41212 452 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 HTR2BP41595 481 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 YPEL3P61236 119 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-212ENST00000605358 IZUMO4Q1ZYL8 232 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 ACTL10Q5JWF8 245 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 POM121L12Q8N7R1 296 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 CCDC71LQ8N9Z2 235 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 ZFAND1Q8TCF1 268 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 Q8WTZ3 238 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 RAB40CQ96S21 281 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 TP53RKQ96S44 253 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 CACFD1Q9UGQ2 172 aa12.84□□□□□ -0.35
CCDC12-212ENST00000605358 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
CCDC12-212ENST00000605358 HNRNPCP07910 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC12-212ENST00000605358 SLC25A4P12235 298 aa12.83□□□□□ -0.36
CCDC12-212ENST00000605358 PPP5CP53041 499 aa12.83□□□□□ -0.36
CCDC12-212ENST00000605358 SPCS3P61009 180 aa12.83□□□□□ -0.36
CCDC12-212ENST00000605358 SNRPD3P62318 126 aaKnown RBP12.83□□□□□ -0.36
CCDC12-212ENST00000605358 DHRS2Q13268 280 aa12.83□□□□□ -0.36
CCDC12-212ENST00000605358 RNASE10Q5GAN6 216 aaKnown RBP12.83□□□□□ -0.36
CCDC12-212ENST00000605358 C16orf54Q6UWD8 224 aa12.83□□□□□ -0.36
CCDC12-212ENST00000605358 OR1S2Q8NGQ3 325 aa12.83□□□□□ -0.36
CCDC12-212ENST00000605358 DEFB131BA0A096LNP1 70 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 MED14OSP0DP75 135 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 UCP1P25874 307 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 LSM3P62310 102 aaKnown RBP12.82□□□□□ -0.36
CCDC12-212ENST00000605358 RNASEH2CQ8TDP1 164 aaKnown RBP12.82□□□□□ -0.36
CCDC12-212ENST00000605358 C15orf40Q8WUR7 153 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 NEU1Q99519 415 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 NDUFAF3Q9BU61 184 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-212ENST00000605358 MRPL36Q9P0J6 103 aaKnown RBP12.82□□□□□ -0.36
CCDC12-212ENST00000605358 COPZ2Q9P299 210 aa12.82□□□□□ -0.36
CCDC12-212ENST00000605358 A0A087WXM4 84 aa12.81□□□□□ -0.36
CCDC12-212ENST00000605358 A0A1B0GVY2 172 aa12.81□□□□□ -0.36
CCDC12-212ENST00000605358 M0QYG6 137 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms