RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 Q8N6K4 173 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 SLC35G3Q8N808 338 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 RNF152Q8N8N0 203 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.01□□□□□ -1.77
VRK3-226ENST00000602029 OR52L2PQ8NGH6 319 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 OR10J5Q8NHC4 309 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 PINX1Q96BK5 328 aaKnown RBP4.01□□□□□ -1.77
VRK3-226ENST00000602029 FAM103A1Q9BTL3 118 aaKnown RBP4.01□□□□□ -1.77
VRK3-226ENST00000602029 SLC35B3Q9H1N7 401 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 FBXL15Q9H469 300 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 NCOR1P1Q9H4R4 102 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 RETNQ9HD89 108 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 MBNL3Q9NUK0 354 aaKnown RBP4.01□□□□□ -1.77
VRK3-226ENST00000602029 TMEM242Q9NWH2 141 aa4.01□□□□□ -1.77
VRK3-226ENST00000602029 METTL1Q9UBP6 276 aaKnown RBP4.01□□□□□ -1.77
VRK3-226ENST00000602029 RCL1Q9Y2P8 373 aaKnown RBP4.01□□□□□ -1.77
VRK3-226ENST00000602029 LSM5Q9Y4Y9 91 aaKnown RBP4.01□□□□□ -1.77
VRK3-226ENST00000602029 IGHV7-81A0A0B4J1V7 117 aa4□□□□□ -1.77
VRK3-226ENST00000602029 RBMY1BA6NDE4 496 aaKnown RBP4□□□□□ -1.77
VRK3-226ENST00000602029 RBMY1EA6NEQ0 496 aaKnown RBP4□□□□□ -1.77
VRK3-226ENST00000602029 C15orf65H3BRN8 121 aa4□□□□□ -1.77
VRK3-226ENST00000602029 WRBO00258 174 aa4□□□□□ -1.77
VRK3-226ENST00000602029 HMGB3O15347 200 aaKnown RBP4□□□□□ -1.77
VRK3-226ENST00000602029 ST8SIA5O15466 376 aa4□□□□□ -1.77
VRK3-226ENST00000602029 LY6G6CO95867 125 aa4□□□□□ -1.77
VRK3-226ENST00000602029 IFNA1P01562 189 aa4□□□□□ -1.77
VRK3-226ENST00000602029 IFNA5P01569 189 aa4□□□□□ -1.77
VRK3-226ENST00000602029 SERPINE2P07093 398 aa4□□□□□ -1.77
VRK3-226ENST00000602029 RBMY1DP0C7P1 496 aaKnown RBP4□□□□□ -1.77
VRK3-226ENST00000602029 CGB3P0DN86 165 aa4□□□□□ -1.77
VRK3-226ENST00000602029 CGB7P0DN87 165 aa4□□□□□ -1.77
VRK3-226ENST00000602029 RCC1P18754 421 aaPredicted RBP4□□□□□ -1.77
VRK3-226ENST00000602029 SULT1A1P50225 295 aa4□□□□□ -1.77
VRK3-226ENST00000602029 SYNJ2BPP57105 145 aa4□□□□□ -1.77
VRK3-226ENST00000602029 FXYD4P59646 89 aa4□□□□□ -1.77
VRK3-226ENST00000602029 RPS16P62249 146 aaKnown RBP4□□□□□ -1.77
VRK3-226ENST00000602029 CFHR3Q02985 330 aa4□□□□□ -1.77
VRK3-226ENST00000602029 CATR1Q13166 79 aa4□□□□□ -1.77
VRK3-226ENST00000602029 CLINT1Q14677 625 aa4□□□□□ -1.77
VRK3-226ENST00000602029 GUK1Q16774 197 aa4□□□□□ -1.77
VRK3-226ENST00000602029 ATP6V1FQ16864 119 aa4□□□□□ -1.77
VRK3-226ENST00000602029 KHDC3LQ587J8 217 aa4□□□□□ -1.77
VRK3-226ENST00000602029 CT45A1Q5HYN5 189 aa4□□□□□ -1.77
VRK3-226ENST00000602029 ASPHD1Q5U4P2 390 aa4□□□□□ -1.77
VRK3-226ENST00000602029 LCN12Q6JVE5 192 aa4□□□□□ -1.77
VRK3-226ENST00000602029 ACSM6Q6P461 480 aa4□□□□□ -1.77
VRK3-226ENST00000602029 ZNF497Q6ZNH5 498 aa4□□□□□ -1.77
VRK3-226ENST00000602029 LYZL2Q7Z4W2 148 aa4□□□□□ -1.77
VRK3-226ENST00000602029 H1FOOQ8IZA3 346 aaPredicted RBP4□□□□□ -1.77
VRK3-226ENST00000602029 SELENOHQ8IZQ5 122 aaKnown RBP4□□□□□ -1.77
VRK3-226ENST00000602029 LINC00311Q8N616 119 aa4□□□□□ -1.77
VRK3-226ENST00000602029 C8orf31Q8N9H6 132 aa4□□□□□ -1.77
VRK3-226ENST00000602029 CT45A3Q8NHU0 189 aa4□□□□□ -1.77
VRK3-226ENST00000602029 MRPL30Q8TCC3 161 aaKnown RBP4□□□□□ -1.77
VRK3-226ENST00000602029 DYNLRB2Q8TF09 96 aa4□□□□□ -1.77
VRK3-226ENST00000602029 MAFIPQ8WZ33 124 aa4□□□□□ -1.77
VRK3-226ENST00000602029 GALMQ96C23 342 aa4□□□□□ -1.77
VRK3-226ENST00000602029 CIB3Q96Q77 187 aaPredicted RBP4□□□□□ -1.77
VRK3-226ENST00000602029 TP53RKQ96S44 253 aa4□□□□□ -1.77
VRK3-226ENST00000602029 ATP5SQ99766 215 aa4□□□□□ -1.77
VRK3-226ENST00000602029 HDHD3Q9BSH5 251 aaPredicted RBP4□□□□□ -1.77
VRK3-226ENST00000602029 HRH4Q9H3N8 390 aa4□□□□□ -1.77
VRK3-226ENST00000602029 LINC00574Q9H8X3 128 aa4□□□□□ -1.77
VRK3-226ENST00000602029 PLEKHA3Q9HB20 300 aa4□□□□□ -1.77
VRK3-226ENST00000602029 TIMM9Q9Y5J7 89 aa4□□□□□ -1.77
VRK3-226ENST00000602029 SAA2-SAA4A0A096LPE2 208 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 FAM74A7A6NL05 159 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 RRHO14718 337 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 SCGB1D2O95969 90 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 CA2P00918 260 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 IGLV1-40P01703 118 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 MBP02144 154 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 APOA2P02652 100 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 PRH1P02810 166 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 SMIM6P0DI80 62 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 SAA2P0DJI9 122 aaPredicted RBP3.99□□□□□ -1.77
VRK3-226ENST00000602029 APELAP0DMC3 54 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 PPIFP30405 207 aaKnown RBP3.99□□□□□ -1.77
VRK3-226ENST00000602029 LGALS7P47929 136 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 PPT1P50897 306 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 ZNF134P52741 427 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 CD81P60033 236 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 CX3CL1P78423 397 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 RUNX1Q01196 453 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 HAGHQ16775 308 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 RPEL1Q2QD12 228 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 Q3ZCU0 254 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 FAM74A3Q4VXF1 159 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 MORN2Q502X0 79 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 PHLDA2Q53GA4 152 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 C4orf48Q5BLP8 95 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 ZNF506Q5JVG8 444 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 AKR1C8PQ5T2L2 129 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 ATRAIDQ6UW56 229 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 ZNF818PQ6ZRF7 136 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 LINC00518Q8N0U6 118 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 TMEM252Q8N6L7 170 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 OR5T1Q8NG75 326 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 OR2G3Q8NGZ4 309 aa3.99□□□□□ -1.77
VRK3-226ENST00000602029 CD300LFQ8TDQ1 290 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms