RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 RS1O15537 224 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 TNFAIP6P98066 277 aaPredicted RBP8.68□□□□□ -1.02
LIG1-220ENST00000601091 ATP1A1-AS1Q5TC04 95 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 Q6ZSR3 168 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 CYP2G1PQ6ZSU1 146 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 TCF24Q7RTU0 167 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 SOX21Q9Y651 276 aaPredicted RBP8.68□□□□□ -1.02
LIG1-220ENST00000601091 TSPOP30536 169 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 C3orf36Q3SXR2 165 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 TEPPQ6URK8 271 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 OR5B3Q8NH48 314 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 SGMS2Q8NHU3 365 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 SRD5A3Q9H8P0 318 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 TMEM106BQ9NUM4 274 aa8.68□□□□□ -1.02
LIG1-220ENST00000601091 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 TRBV6-6A0A0A6YYG2 114 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 KBTBD11-OT1A0A1B0GTJ5 212 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 HSBP1O75506 76 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 CELA3BP08861 270 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 SIGLECL1Q8N7X8 197 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 FLYWCH2Q96CP2 140 aaKnown RBP8.67□□□□□ -1.02
LIG1-220ENST00000601091 WDYHV1Q96HA8 205 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 TXNDC17Q9BRA2 123 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 IGHV3OR15-7A0A075B7D8 119 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 C17orf98A8MV24 154 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 HYPMO75409 117 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 HIST1H1EP10412 219 aaKnown RBP8.67□□□□□ -1.02
LIG1-220ENST00000601091 MPV17L2Q567V2 206 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 LRRC10Q5BKY1 277 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 LYRM7Q5U5X0 104 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 SPSB3Q6PJ21 355 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 BORCS7Q96B45 105 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 ACY3Q96HD9 319 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 GPR82Q96P67 336 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 TCF19Q9Y242 345 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 PXMP4Q9Y6I8 212 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 TRAV38-1A0A0B4J264 116 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 FCN1O00602 326 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 PRRG2O14669 202 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 IL3RAP26951 378 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 RTP5Q14D33 572 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 PNKDQ8N490 385 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 DEFB124Q8NES8 71 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
LIG1-220ENST00000601091 IGKV1-6A0A0C4DH72 117 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 hADV38S2A0JD32 116 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 IQCF6A8MYZ5 107 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 ATP5G2Q06055 141 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 ACP7Q6ZNF0 438 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 C20orf204Q6ZNR8 217 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 TMEM105Q8N8V8 129 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 TIMM8BQ9Y5J9 83 aaPredicted RBP8.66□□□□□ -1.02
LIG1-220ENST00000601091 PCSK4Q6UW60 755 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 OR5AU1Q8NGC0 362 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 NPCDR1Q9BY65 106 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 VSIRQ9H7M9 311 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 RNF7Q9UBF6 113 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 LILRA1O75019 489 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 TMEM50AO95807 157 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 CD55P08174 381 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 CT45A10P0DMU9 189 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 EGR1P18146 543 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 IGHV1-2P23083 117 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 CNN1P51911 297 aaKnown RBP8.66□□□□□ -1.02
LIG1-220ENST00000601091 ZFAND6Q6FIF0 208 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 PRNDQ9UKY0 176 aa8.66□□□□□ -1.02
LIG1-220ENST00000601091 A0A0G2JRQ6 117 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 MBD3L4A6NDZ8 208 aaPredicted RBP8.65□□□□□ -1.02
LIG1-220ENST00000601091 MBD3L3A6NE82 208 aaPredicted RBP8.65□□□□□ -1.02
LIG1-220ENST00000601091 MBD3L5A6NJ08 208 aaPredicted RBP8.65□□□□□ -1.02
LIG1-220ENST00000601091 IGKV1-5P01602 117 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 SMIM17P0DL12 118 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 DEFA4P12838 97 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 IGFBP2P18065 325 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 UBE2G1P62253 170 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 ZNF146Q15072 292 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 PSG5Q15238 335 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 Q6ZRM9 215 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 LRRC75A-AS1Q8N1F1 130 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 TECRQ9NZ01 308 aaKnown RBP8.65□□□□□ -1.02
LIG1-220ENST00000601091 NAT8BQ9UHF3 227 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 PRR14LQ5THK1 2151 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 SPTBN2O15020 2390 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 FABP5P3A8MUU1 101 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 COX7A2P2O60397 106 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 CRISP2P16562 243 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 TIRAPP58753 221 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 MIC13Q5XKP0 118 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 OR2K2Q8NGT1 345 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 TMEM242Q9NWH2 141 aa8.65□□□□□ -1.02
LIG1-220ENST00000601091 FAM90A27PA6NNH2 459 aa8.65□□□□□ -1.03
LIG1-220ENST00000601091 FAM157AC9JC47 383 aa8.65□□□□□ -1.03
LIG1-220ENST00000601091 J3QR06 171 aa8.65□□□□□ -1.03
LIG1-220ENST00000601091 SP9P0CG40 484 aa8.65□□□□□ -1.03
LIG1-220ENST00000601091 DTX1Q86Y01 620 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms