RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TMEM231Q9H6L2 316 aa12.45□□□□□ -0.42
SCAF1-204ENST00000601038 ENY2Q9NPA8 101 aa12.45□□□□□ -0.42
SCAF1-204ENST00000601038 PLECQ15149 4684 aaKnown RBP12.45□□□□□ -0.42
SCAF1-204ENST00000601038 IGHV3-66A0A0C4DH42 116 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 A0A1W2PS18 150 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 CLN5O75503 358 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 GABARAPO95166 117 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 HOXA1P49639 335 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-204ENST00000601038 TAS2R19P59542 299 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 DEFB131AP59861 70 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 MLANAQ16655 118 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 OR13C8Q8NGS7 320 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 OR4X1Q8NH49 305 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
SCAF1-204ENST00000601038 NAA50Q9GZZ1 169 aaKnown RBP12.44□□□□□ -0.42
SCAF1-204ENST00000601038 FNDC4Q9H6D8 234 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-204ENST00000601038 MRPL36Q9P0J6 103 aaKnown RBP12.44□□□□□ -0.42
SCAF1-204ENST00000601038 A0A0G2JRQ6 117 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 RAB3DO95716 219 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 CA1P00915 261 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-204ENST00000601038 OPRK1P41145 380 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 BSXQ3C1V8 233 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 SCGB2B2Q4G0G5 96 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 LEMD1Q68G75 181 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 LGALS9CQ6DKI2 356 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 C11orf45Q8TAV5 145 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 METTL26Q96S19 204 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 ALMS1Q8TCU4 4167 aa12.43□□□□□ -0.42
SCAF1-204ENST00000601038 CRYBB3P26998 211 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
SCAF1-204ENST00000601038 SPCS3P61009 180 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 TMEM187Q14656 261 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 AARDQ4LEZ3 155 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 Q6ZRM9 215 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 FAM219AQ8IW50 185 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 FAM24BQ8N5W8 94 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 OR52E5Q8NH55 327 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 RNASE11Q8TAA1 199 aaKnown RBP12.42□□□□□ -0.42
SCAF1-204ENST00000601038 MARCH1Q8TCQ1 289 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 RABAC1Q9UI14 185 aa12.42□□□□□ -0.42
SCAF1-204ENST00000601038 TRAV30A0A087WSZ9 112 aa12.41□□□□□ -0.42
SCAF1-204ENST00000601038 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
SCAF1-204ENST00000601038 CDS2O95674 445 aa12.41□□□□□ -0.42
SCAF1-204ENST00000601038 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
SCAF1-204ENST00000601038 RBMS2Q15434 407 aaKnown RBP12.41□□□□□ -0.42
SCAF1-204ENST00000601038 STHQ8IWL8 128 aa12.41□□□□□ -0.42
SCAF1-204ENST00000601038 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
SCAF1-204ENST00000601038 TMEM230Q96A57 120 aa12.41□□□□□ -0.42
SCAF1-204ENST00000601038 TMEM222Q9H0R3 208 aa12.41□□□□□ -0.42
SCAF1-204ENST00000601038 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.41□□□□□ -0.42
SCAF1-204ENST00000601038 K7EQG2 157 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 IGKV1-17P01599 117 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 IFNA4P05014 189 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 OR5AC1P0C628 307 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 HTR2BP41595 481 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 P2RY1P47900 373 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 GPR107Q5VW38 600 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
SCAF1-204ENST00000601038 STXBP6Q8NFX7 210 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 GRAMD2BQ96HH9 432 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 NARS2Q96I59 477 aaKnown RBP12.4□□□□□ -0.42
SCAF1-204ENST00000601038 RTBDNQ9BSG5 229 aaPredicted RBP12.4□□□□□ -0.42
SCAF1-204ENST00000601038 FBXL17Q9UF56 701 aa12.4□□□□□ -0.42
SCAF1-204ENST00000601038 C14orf166Q9Y224 244 aaKnown RBP12.4□□□□□ -0.42
SCAF1-204ENST00000601038 TEX13DA0A0J9YY54 714 aaPredicted RBP12.39□□□□□ -0.43
SCAF1-204ENST00000601038 RPS10-NUDT3A0A1W2PQS6 291 aa12.39□□□□□ -0.43
SCAF1-204ENST00000601038 DEFB4AO15263 64 aa12.39□□□□□ -0.43
SCAF1-204ENST00000601038 SMIM18P0DKX4 95 aa12.39□□□□□ -0.43
SCAF1-204ENST00000601038 MRPS10P82664 201 aaKnown RBP12.39□□□□□ -0.43
SCAF1-204ENST00000601038 MEF2DQ14814 521 aa12.39□□□□□ -0.43
SCAF1-204ENST00000601038 SURF2Q15527 256 aaPredicted RBP12.39□□□□□ -0.43
SCAF1-204ENST00000601038 TIGITQ495A1 244 aa12.39□□□□□ -0.43
SCAF1-204ENST00000601038 TMEM41BQ5BJD5 291 aa12.39□□□□□ -0.43
SCAF1-204ENST00000601038 RBPMSQ93062 196 aaKnown RBP12.39□□□□□ -0.43
SCAF1-204ENST00000601038 MIXL1Q9H2W2 232 aa12.39□□□□□ -0.43
SCAF1-204ENST00000601038 GIG44P09565 113 aaPredicted RBP12.38□□□□□ -0.43
SCAF1-204ENST00000601038 DHODHQ02127 395 aa12.38□□□□□ -0.43
SCAF1-204ENST00000601038 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
SCAF1-204ENST00000601038 TRPT1Q86TN4 253 aaKnown RBP12.38□□□□□ -0.43
SCAF1-204ENST00000601038 SELENOHQ8IZQ5 122 aaKnown RBP12.38□□□□□ -0.43
SCAF1-204ENST00000601038 LHFPL5Q8TAF8 219 aa12.38□□□□□ -0.43
SCAF1-204ENST00000601038 DCANP1Q8TF63 244 aa12.38□□□□□ -0.43
SCAF1-204ENST00000601038 NAA60Q9H7X0 242 aa12.38□□□□□ -0.43
SCAF1-204ENST00000601038 HEYLQ9NQ87 328 aaPredicted RBP12.38□□□□□ -0.43
SCAF1-204ENST00000601038 U3KQE9 123 aa12.38□□□□□ -0.43
SCAF1-204ENST00000601038 AGRNO00468 2067 aa12.38□□□□□ -0.43
SCAF1-204ENST00000601038 DISC1C4P0D8 188 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 RGS5O15539 181 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 DEDDO75618 318 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 IGLC1P0CG04 106 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 SPP1P10451 314 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 SLC25A4P12235 298 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 TCTAP57738 103 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 FAAP20Q6NZ36 180 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
SCAF1-204ENST00000601038 Q8NAQ8 132 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 OR1S2Q8NGQ3 325 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms