RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 KRASP01116 189 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 OR4E1P0C645 316 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 G6PCP35575 357 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 PVRIGQ6DKI7 326 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 RBPMS2Q6ZRY4 209 aaKnown RBP12.84□□□□□ -0.35
SSBP4-207ENST00000600244 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
SSBP4-207ENST00000600244 LRTM2Q8N967 370 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 ZNF430Q9H8G1 570 aaPredicted RBP12.84□□□□□ -0.35
SSBP4-207ENST00000600244 TMEM140Q9NV12 185 aa12.84□□□□□ -0.35
SSBP4-207ENST00000600244 TRAV3A0A0B4J244 114 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 PTTG1O95997 202 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 P0DMU3 169 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 FAM231AP0DMU4 169 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 FAM231CP0DMU5 169 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 DHRS2Q13268 280 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 TRIM16LQ309B1 348 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 SSX9Q7RTT3 188 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 MMD2Q8IY49 270 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 NECAP1Q8NC96 275 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 DMBX1Q8NFW5 382 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 RBPMSQ93062 196 aaKnown RBP12.83□□□□□ -0.36
SSBP4-207ENST00000600244 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.36
SSBP4-207ENST00000600244 RNF126Q9BV68 326 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 CSTL1Q9H114 145 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
SSBP4-207ENST00000600244 ANXA3P12429 323 aa12.82□□□□□ -0.36
SSBP4-207ENST00000600244 VAMP1P23763 118 aa12.82□□□□□ -0.36
SSBP4-207ENST00000600244 MAS1LP35410 378 aa12.82□□□□□ -0.36
SSBP4-207ENST00000600244 ERVK-16P61578 105 aa12.82□□□□□ -0.36
SSBP4-207ENST00000600244 SRPXP78539 464 aa12.82□□□□□ -0.36
SSBP4-207ENST00000600244 PHB2Q99623 299 aa12.82□□□□□ -0.36
SSBP4-207ENST00000600244 A0A0G2JRQ6 117 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 MPTX1A8MV57 137 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 CREBL2O60519 120 aaPredicted RBP12.81□□□□□ -0.36
SSBP4-207ENST00000600244 IL5P05113 134 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 ADMP35318 185 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 RBMY1FQ15415 496 aaKnown RBP12.81□□□□□ -0.36
SSBP4-207ENST00000600244 C15orf32Q32M92 178 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 FAM106AQ4KMX7 169 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 TMEM268Q5VZI3 342 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 PLET1Q6UQ28 207 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 LGI3Q8N145 548 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
SSBP4-207ENST00000600244 MARC2Q969Z3 335 aa12.81□□□□□ -0.36
SSBP4-207ENST00000600244 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 A0A0B4J2A0 478 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 A0A1B0GW64 132 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 DUXBA0A1W2PPF3 345 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 ATG12O94817 140 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 RPL8P62917 257 aaKnown RBP12.8□□□□□ -0.36
SSBP4-207ENST00000600244 NMSQ5H8A3 153 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 SOHLH1Q5JUK2 328 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 Q6ZRM9 215 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 H2BFWTQ7Z2G1 175 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 FAM219AQ8IW50 185 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 SLC35G3Q8N808 338 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 MITD1Q8WV92 249 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 CCDC140Q96MF4 163 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 TMEM14BQ9NUH8 114 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 SHPKQ9UHJ6 478 aa12.8□□□□□ -0.36
SSBP4-207ENST00000600244 A0A0B4J293 547 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 PIGBOS1A0A0B4J2F0 54 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 CGB1A6NKQ9 187 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 DBX1A6NMT0 343 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 E7EUB6 86 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 INMT-MINDY4F8WBC2 141 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 TSPAN4O14817 238 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 OR2J3O76001 311 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 MYOD1P15172 320 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 HLA-GP17693 338 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 HLA-DMBP28068 263 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 AARDQ4LEZ3 155 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 C4orf46Q504U0 113 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 C10orf55Q5SWW7 151 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 LYZL2Q7Z4W2 148 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 OR5B3Q8NH48 314 aa12.79□□□□□ -0.36
SSBP4-207ENST00000600244 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
SSBP4-207ENST00000600244 MRPL27Q9P0M9 148 aaKnown RBP12.79□□□□□ -0.36
SSBP4-207ENST00000600244 C15orf61A6NNL5 157 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 AMBPP02760 352 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 ARL3P36405 182 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 AKR1C2P52895 323 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 OR2B8PP59922 312 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 TNXAQ16473 311 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 UNQ9165/PRO28630Q6UXU0 137 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 Q6ZTC4 211 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 TTC9CQ8N5M4 171 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
SSBP4-207ENST00000600244 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 SEC22CQ9BRL7 303 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 NSG2Q9Y328 171 aa12.78□□□□□ -0.36
SSBP4-207ENST00000600244 TEX22C9J3V5 150 aa12.77□□□□□ -0.37
SSBP4-207ENST00000600244 SNAPC5O75971 98 aa12.77□□□□□ -0.37
SSBP4-207ENST00000600244 RGS21Q2M5E4 152 aa12.77□□□□□ -0.37
SSBP4-207ENST00000600244 Q8NAQ8 132 aa12.77□□□□□ -0.37
SSBP4-207ENST00000600244 RRNAD1Q96FB5 475 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms