RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PDCD10Q9BUL8 212 aa15.36■□□□□ 0.05
PNKP-212ENST00000599454 CLN5O75503 358 aa15.35■□□□□ 0.05
PNKP-212ENST00000599454 CRYBB3P26998 211 aa15.35■□□□□ 0.05
PNKP-212ENST00000599454 RND3P61587 244 aa15.35■□□□□ 0.05
PNKP-212ENST00000599454 SPINK9Q5DT21 86 aa15.35■□□□□ 0.05
PNKP-212ENST00000599454 IFNA17P01571 189 aa15.34■□□□□ 0.05
PNKP-212ENST00000599454 APOA1P02647 267 aa15.34■□□□□ 0.05
PNKP-212ENST00000599454 P0C879 139 aa15.34■□□□□ 0.05
PNKP-212ENST00000599454 P2RY1P47900 373 aa15.34■□□□□ 0.05
PNKP-212ENST00000599454 IGHV4-4A0A075B6R2 117 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 IGKV1-5P01602 117 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 RNASE2P10153 161 aaKnown RBP15.33■□□□□ 0.04
PNKP-212ENST00000599454 RPL5P46777 297 aaKnown RBP15.33■□□□□ 0.04
PNKP-212ENST00000599454 EIF2B2P49770 351 aaKnown RBP15.33■□□□□ 0.04
PNKP-212ENST00000599454 AKR1C2P52895 323 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 IZUMO4Q1ZYL8 232 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 Q6ZTC4 211 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 OR4X1Q8NH49 305 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 RNF126Q9BV68 326 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 X6R8D5 127 aa15.33■□□□□ 0.04
PNKP-212ENST00000599454 A0A0B4J293 547 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 ZNF688P0C7X2 276 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 C4BPBP20851 252 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 OPRK1P41145 380 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 DCANP1Q8TF63 244 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 TMEM230Q96A57 120 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 ENY2Q9NPA8 101 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 TBC1D24Q9ULP9 559 aa15.32■□□□□ 0.04
PNKP-212ENST00000599454 KIAA1109Q2LD37 5005 aa15.31■□□□□ 0.04
PNKP-212ENST00000599454 MUC4Q99102 2169 aa15.31■□□□□ 0.04
PNKP-212ENST00000599454 TRAV30A0A087WSZ9 112 aa15.31■□□□□ 0.04
PNKP-212ENST00000599454 HOXA1P49639 335 aaPredicted RBP15.31■□□□□ 0.04
PNKP-212ENST00000599454 LSM3P62310 102 aaKnown RBP15.31■□□□□ 0.04
PNKP-212ENST00000599454 SNX29P2Q8IUI4 249 aa15.31■□□□□ 0.04
PNKP-212ENST00000599454 YIPF6Q96EC8 236 aa15.31■□□□□ 0.04
PNKP-212ENST00000599454 FNDC4Q9H6D8 234 aaPredicted RBP15.31■□□□□ 0.04
PNKP-212ENST00000599454 COMMD3Q9UBI1 195 aa15.31■□□□□ 0.04
PNKP-212ENST00000599454 ELOA3CA0A087WX78 387 aaPredicted RBP15.3■□□□□ 0.04
PNKP-212ENST00000599454 HELTA6NFD8 242 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 KNCNA6PVL3 124 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 PGAM2P15259 253 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 PPP5CP53041 499 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 PIGPP57054 158 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 ACTL10Q5JWF8 245 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 CSNK1G2-AS1Q8NCQ2 148 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 TP53RKQ96S44 253 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 VCX3AQ9NNX9 186 aa15.3■□□□□ 0.04
PNKP-212ENST00000599454 MRPL36Q9P0J6 103 aaKnown RBP15.3■□□□□ 0.04
PNKP-212ENST00000599454 AMBPP02760 352 aa15.29■□□□□ 0.04
PNKP-212ENST00000599454 ETV6P41212 452 aa15.29■□□□□ 0.04
PNKP-212ENST00000599454 AP2S1P53680 142 aaPredicted RBP15.29■□□□□ 0.04
PNKP-212ENST00000599454 BSXQ3C1V8 233 aa15.29■□□□□ 0.04
PNKP-212ENST00000599454 LHFPL1Q86WI0 220 aa15.29■□□□□ 0.04
PNKP-212ENST00000599454 C3orf85A0A1B0GTC6 90 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 RPS10-NUDT3A0A1W2PQS6 291 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 M0QYG6 137 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 IGKV1-17P01599 117 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 ARRDC1Q8N5I2 433 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 RRNAD1Q96FB5 475 aaKnown RBP15.28■□□□□ 0.04
PNKP-212ENST00000599454 C1QTNF4Q9BXJ3 329 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 U3KQE9 123 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 PCLOQ9Y6V0 5065 aa15.28■□□□□ 0.04
PNKP-212ENST00000599454 B3GALNT1O75752 331 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 PI3P19957 117 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 NUTF2P61970 127 aaKnown RBP15.27■□□□□ 0.04
PNKP-212ENST00000599454 DHRS2Q13268 280 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 TRIM16LQ309B1 348 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 TIGITQ495A1 244 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 RNASE10Q5GAN6 216 aaKnown RBP15.27■□□□□ 0.04
PNKP-212ENST00000599454 CCDC71LQ8N9Z2 235 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 RAB40CQ96S21 281 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 SEPSECSQ9HD40 501 aaKnown RBP15.27■□□□□ 0.04
PNKP-212ENST00000599454 COPZ2Q9P299 210 aa15.27■□□□□ 0.04
PNKP-212ENST00000599454 DEFB131BA0A096LNP1 70 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 HNRNPCP07910 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
PNKP-212ENST00000599454 P0DMU3 169 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 FAM231AP0DMU4 169 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 FAM231CP0DMU5 169 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 TBPP20226 339 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 HTR2BP41595 481 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 MLANAQ16655 118 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 OR1S2Q8NGQ3 325 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 ZFAND1Q8TCF1 268 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 CLEC5AQ9NY25 188 aa15.26■□□□□ 0.03
PNKP-212ENST00000599454 ELK1P19419 428 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 UCP1P25874 307 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 SPCS3P61009 180 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 C12orf74Q32Q52 190 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 PSMG4Q5JS54 123 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 C16orf54Q6UWD8 224 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 FAM219AQ8IW50 185 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 POM121L12Q8N7R1 296 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 OR52E5Q8NH55 327 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 RNASE11Q8TAA1 199 aaKnown RBP15.25■□□□□ 0.03
PNKP-212ENST00000599454 Q8WTZ3 238 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 GLMPQ8WWB7 406 aa15.25■□□□□ 0.03
PNKP-212ENST00000599454 A0A087WXM4 84 aa15.24■□□□□ 0.03
PNKP-212ENST00000599454 A0A1B0GVY2 172 aa15.24■□□□□ 0.03
PNKP-212ENST00000599454 IGLC1P0CG04 106 aa15.24■□□□□ 0.03
PNKP-212ENST00000599454 SLC25A4P12235 298 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms