RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 TRBV6-7A0A0A0MS04 114 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 NAPSAO96009 420 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 IGFBP3P17936 291 aaPredicted RBP9.87□□□□□ -0.83
SCN8A-208ENST00000599343 CD33P20138 364 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 FAM89BQ8N5H3 189 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 PHLDA1Q8WV24 401 aaPredicted RBP9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BKO60814 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BJP06899 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 OR9G9P0C7N8 305 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 GZMBP10144 247 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BOP23527 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BBP33778 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BDP58876 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BCP62807 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST2H2BEQ16778 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 CD300EQ496F6 205 aaPredicted RBP9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BHQ93079 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 LYZL4Q96KX0 146 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BNQ99877 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 HIST1H2BMQ99879 126 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 NAA38Q9BRA0 125 aaKnown RBP9.87□□□□□ -0.83
SCN8A-208ENST00000599343 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 ZCCHC24Q8N2G6 241 aaKnown RBP9.87□□□□□ -0.83
SCN8A-208ENST00000599343 LAMB2P55268 1798 aa9.87□□□□□ -0.83
SCN8A-208ENST00000599343 TRAV5A0A0B4J249 113 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 VDAC2P45880 294 aaPredicted RBP9.86□□□□□ -0.83
SCN8A-208ENST00000599343 NR2C2APQ86WQ0 139 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 MARF1Q9Y4F3 1742 aaKnown RBP9.86□□□□□ -0.83
SCN8A-208ENST00000599343 SPTBP11277 2137 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 C17orf100A8MU93 164 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 C3orf36Q3SXR2 165 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 SRSF6Q13247 344 aaKnown RBP9.86□□□□□ -0.83
SCN8A-208ENST00000599343 TDRD6O60522 2096 aaKnown RBP9.86□□□□□ -0.83
SCN8A-208ENST00000599343 TCRBV4S1A1TA0A5B7 111 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 LYNX1G3V0Z9 82 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 LYNX1P0DP58 116 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 MORN2Q502X0 79 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 SIGMAR1Q99720 223 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 YAE1D1Q9NRH1 226 aa9.86□□□□□ -0.83
SCN8A-208ENST00000599343 SNRNP200O75643 2136 aaKnown RBP9.85□□□□□ -0.83
SCN8A-208ENST00000599343 RHOGP84095 191 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 LY6G6FQ5SQ64 297 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 PVRIGQ6DKI7 326 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 DMRTC2Q8IXT2 367 aaPredicted RBP9.85□□□□□ -0.83
SCN8A-208ENST00000599343 C11orf44Q8N8P7 122 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 SLC50A1Q9BRV3 221 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 FOXD3Q9UJU5 478 aaPredicted RBP9.85□□□□□ -0.83
SCN8A-208ENST00000599343 CSRP3P50461 194 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 TDGF1P3P51864 188 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 OSTCQ9NRP0 149 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 H0YIZ8 118 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 C1orf162Q8NEQ5 155 aaPredicted RBP9.85□□□□□ -0.83
SCN8A-208ENST00000599343 FAM57AQ8TBR7 257 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 SLC25A28Q96A46 364 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 DPH3P1Q9H4G8 78 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 GP6Q9HCN6 339 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 EFNB3Q15768 340 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 ZNF497Q6ZNH5 498 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 WBP1Q96G27 269 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 CRIM1Q9NZV1 1036 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 LINC00158P58513 81 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 TMEM155Q4W5P6 130 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 ABHD17AQ96GS6 310 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 SLC25A2Q9BXI2 301 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 LINC00527Q9UJ94 153 aa9.85□□□□□ -0.83
SCN8A-208ENST00000599343 A8MWV9 139 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 YPEL1O60688 119 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 OR10W1Q8NGF6 305 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 YPEL2Q96QA6 119 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 SIPA1L3O60292 1781 aaPredicted RBP9.84□□□□□ -0.83
SCN8A-208ENST00000599343 FXYD7P58549 80 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 PSMG4Q5JS54 123 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 IGKV2-40A0A087WW87 121 aaPredicted RBP9.84□□□□□ -0.83
SCN8A-208ENST00000599343 IGHV3-73A0A0B4J1V6 119 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 ADARB2-AS1A8MUL3 147 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 NCR2O95944 276 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 IGKV2D-40P01614 121 aaPredicted RBP9.84□□□□□ -0.83
SCN8A-208ENST00000599343 PLNP26678 52 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 LINC00114Q6XXX2 140 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 FAM90A1Q86YD7 464 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 A0A0A6YYD4 124 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 GGTLC3B5MD39 225 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 CRPP02741 224 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 GNB1LQ9BYB4 327 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 CACNA1IQ9P0X4 2223 aa9.84□□□□□ -0.83
SCN8A-208ENST00000599343 NPIPB5A8MRT5 1133 aa9.83□□□□□ -0.84
SCN8A-208ENST00000599343 M0R2P5 195 aa9.83□□□□□ -0.84
SCN8A-208ENST00000599343 ORMDL2Q53FV1 153 aa9.83□□□□□ -0.84
SCN8A-208ENST00000599343 IFI27L1Q96BM0 104 aa9.83□□□□□ -0.84
SCN8A-208ENST00000599343 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
SCN8A-208ENST00000599343 TMEM133Q9H2Q1 129 aa9.83□□□□□ -0.84
SCN8A-208ENST00000599343 IGKV1-9A0A0C4DH69 117 aa9.83□□□□□ -0.84
SCN8A-208ENST00000599343 CXCL1P09341 107 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms