RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 TNFSF8P32971 234 aa17.09■□□□□ 0.33
SSBP4-205ENST00000598159 ODF3L2Q3SX64 289 aa17.09■□□□□ 0.33
SSBP4-205ENST00000598159 TOMM20LQ6UXN7 152 aa17.09■□□□□ 0.33
SSBP4-205ENST00000598159 ZNF600Q6ZNG1 722 aa17.09■□□□□ 0.33
SSBP4-205ENST00000598159 Q6ZWC4 215 aa17.09■□□□□ 0.33
SSBP4-205ENST00000598159 SOSTQ9BQB4 213 aa17.09■□□□□ 0.33
SSBP4-205ENST00000598159 KIR2DL5BA0A0G2JN68 375 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 KIR2DL5BA0A0G2JPC4 375 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 BSXQ3C1V8 233 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 FAM90A2PQ658T7 463 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 KIR2DL5AQ8N109 375 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 KIR2DL5BQ8NHK3 375 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 LHFPL5Q8TAF8 219 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 GPR146Q96CH1 333 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 CACFD1Q9UGQ2 172 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 TMEM56-RWDD3S4R434 201 aa17.08■□□□□ 0.32
SSBP4-205ENST00000598159 IGHV3-49A0A0A0MS15 119 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 SCGB2A1O75556 95 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 HTR2BP41595 481 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 PAFAH1B2P68402 229 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 TMEM268Q5VZI3 342 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 WFDC3Q8IUB2 231 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 OR4X1Q8NH49 305 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 GALNT14Q96FL9 552 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 TP53TG1Q9Y2A0 90 aa17.07■□□□□ 0.32
SSBP4-205ENST00000598159 PUS1Q9Y606 427 aaKnown RBP eCLIP17.07■□□□□ 0.32
SSBP4-205ENST00000598159 TENM2Q9NT68 2774 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 CLN5O75503 358 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 OPRK1P41145 380 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 MLANAQ16655 118 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 STPG3Q8N7X2 389 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 MCFD2Q8NI22 146 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 IL22RA2Q969J5 263 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 FNDC4Q9H6D8 234 aaPredicted RBP17.06■□□□□ 0.32
SSBP4-205ENST00000598159 VSIRQ9H7M9 311 aa17.06■□□□□ 0.32
SSBP4-205ENST00000598159 TRAV30A0A087WSZ9 112 aa17.05■□□□□ 0.32
SSBP4-205ENST00000598159 SPRY2O43597 315 aa17.05■□□□□ 0.32
SSBP4-205ENST00000598159 HEYLQ9NQ87 328 aaPredicted RBP17.05■□□□□ 0.32
SSBP4-205ENST00000598159 CACNG5Q9UF02 275 aa17.05■□□□□ 0.32
SSBP4-205ENST00000598159 IGHV3OR16-13A0A075B7E8 117 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 IGHV3-74A0A0B4J1X5 117 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 RPS10-NUDT3A0A1W2PQS6 291 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 NPPCP23582 126 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 C2orf83Q53S99 150 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 TCF24Q7RTU0 167 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 ZFAND3Q9H8U3 227 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 MCUBQ9NWR8 336 aa17.04■□□□□ 0.32
SSBP4-205ENST00000598159 IGKV3-7A0A075B6H7 116 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 A0A1B0GU03 582 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 TFPI2P48307 235 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 TMEM187Q14656 261 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 ST8SIA2Q92186 375 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 TMEM230Q96A57 120 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 TMEM231Q9H6L2 316 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 MAP6D1Q9H9H5 199 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 CSMD3Q7Z407 3707 aa17.03■□□□□ 0.32
SSBP4-205ENST00000598159 A0A1W2PS18 150 aa17.02■□□□□ 0.32
SSBP4-205ENST00000598159 CEBPZOSA8MTT3 80 aa17.02■□□□□ 0.32
SSBP4-205ENST00000598159 APOHP02749 345 aaPredicted RBP17.02■□□□□ 0.32
SSBP4-205ENST00000598159 NOXA1Q86UR1 476 aa17.02■□□□□ 0.32
SSBP4-205ENST00000598159 APRG1Q8IVJ8 170 aa17.02■□□□□ 0.32
SSBP4-205ENST00000598159 GBGT1Q8N5D6 347 aa17.02■□□□□ 0.32
SSBP4-205ENST00000598159 RNASEH2CQ8TDP1 164 aaKnown RBP17.02■□□□□ 0.32
SSBP4-205ENST00000598159 MRPL36Q9P0J6 103 aaKnown RBP17.02■□□□□ 0.32
SSBP4-205ENST00000598159 STARD9Q9P2P6 4700 aa17.01■□□□□ 0.31
SSBP4-205ENST00000598159 SULT1A3P0DMM9 295 aa17.01■□□□□ 0.31
SSBP4-205ENST00000598159 SULT1A4P0DMN0 295 aa17.01■□□□□ 0.31
SSBP4-205ENST00000598159 AKR1C4P17516 323 aa17.01■□□□□ 0.31
SSBP4-205ENST00000598159 RPL35AP18077 110 aaKnown RBP17.01■□□□□ 0.31
SSBP4-205ENST00000598159 FAUP35544 74 aaKnown RBP17.01■□□□□ 0.31
SSBP4-205ENST00000598159 LILRB2Q8N423 598 aa17.01■□□□□ 0.31
SSBP4-205ENST00000598159 RNF183Q96D59 192 aa17.01■□□□□ 0.31
SSBP4-205ENST00000598159 DYNC2H1Q8NCM8 4307 aaKnown RBP17.01■□□□□ 0.31
SSBP4-205ENST00000598159 TRAV2A0A0B4J234 112 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 DNASE2O00115 360 aaPredicted RBP17■□□□□ 0.31
SSBP4-205ENST00000598159 DFFBO76075 338 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 SLC25A4P12235 298 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 ANXA3P12429 323 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 DEFB135Q30KP9 77 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 ETFRF1Q6IPR1 90 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 SLC24A4Q8NFF2 622 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 METTL26Q96S19 204 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 RYR2Q92736 4967 aa17■□□□□ 0.31
SSBP4-205ENST00000598159 A0A0B4J2A0 478 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 PIGBOS1A0A0B4J2F0 54 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 CRYBB3P26998 211 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 CCR6P51684 374 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 AP3S2P59780 193 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 RPL11P62913 178 aaKnown RBP16.99■□□□□ 0.31
SSBP4-205ENST00000598159 TNFRSF9Q07011 255 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 NMSQ5H8A3 153 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 CSTL1Q9H114 145 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 MS4A6AQ9H2W1 248 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 SHPKQ9UHJ6 478 aa16.99■□□□□ 0.31
SSBP4-205ENST00000598159 IGHV3-66A0A0C4DH42 116 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 IGKV1-17P01599 117 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 SUPT4H1P63272 117 aaKnown RBP16.98■□□□□ 0.31
SSBP4-205ENST00000598159 SRPXP78539 464 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 TIGITQ495A1 244 aa16.98■□□□□ 0.31
SSBP4-205ENST00000598159 PYDC2Q56P42 97 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms