RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 FAM90A2PQ658T7 463 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 FAM24BQ8N5W8 94 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 ZFAND1Q8TCF1 268 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 DEDD2Q8WXF8 326 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 OR10C1Q96KK4 312 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 ATP6V0BQ99437 205 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 PRRT1Q99946 306 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 KRTAP17-1Q9BYP8 105 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 SRRQ9GZT4 340 aa8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 KLK5Q9Y337 293 aaPredicted RBP8.88□□□□□ -0.99
SOX2-OT-228ENST00000597828 HECTD4Q9Y4D8 3996 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 LINC00854A0A1B0GVQ3 168 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 DEFB4AO15263 64 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 MFAP4P55083 255 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 PRCDQ00LT1 54 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 RELQ04864 619 aaPredicted RBP8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 ZNF79Q15937 498 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 TCF24Q7RTU0 167 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 H2BFWTQ7Z2G1 175 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 CADM3Q8N126 398 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 LILRB2Q8N423 598 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 TERB2Q8NHR7 220 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 TSC22D3Q99576 134 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 CCDC32Q9BV29 185 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 FKBP11Q9NYL4 201 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 FBXL17Q9UF56 701 aa8.87□□□□□ -0.99
SOX2-OT-228ENST00000597828 NAP1L6A6NFF2 107 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 MPTX1A8MV57 137 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 GNG7O60262 68 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 ATF4P18848 351 aaPredicted RBP8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 UCP3P55916 312 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 LEMD1Q68G75 181 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 LHFPL1Q86WI0 220 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 OR4D10Q8NGI6 311 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 OR4A16Q8NH70 328 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 RARRES2Q99969 163 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 C14orf166Q9Y224 244 aaKnown RBP8.86□□□□□ -0.99
SOX2-OT-228ENST00000597828 TRAV14DV4A0A0A6YYC5 116 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 CA1P00915 261 aaPredicted RBP8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 PI3P19957 117 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 BAK1Q16611 211 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 MZT2BQ6NZ67 158 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 TOMM20LQ6UXN7 152 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 TMEM217Q8N7C4 229 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 CCDC71LQ8N9Z2 235 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 OR51S1Q8NGJ8 323 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 OR4C16Q8NGL9 310 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 OR11H2Q8NH07 326 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 C7orf50Q9BRJ6 194 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 MRPL36Q9P0J6 103 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 COPZ2Q9P299 210 aa8.85□□□□□ -0.99
SOX2-OT-228ENST00000597828 A0A1B0GU03 582 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 ST8SIA3O43173 380 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 DFFBO76075 338 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 IGKV1-5P01602 117 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 IL7P13232 177 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 DEFB131AP59861 70 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 HSPE1P61604 102 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 PRR20EP86478 221 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 PRR20CP86479 221 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 PRR20DP86480 221 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 PRR20BP86481 221 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 PRR20AP86496 221 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 C11orf45Q8TAV5 145 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 GATAD1Q8WUU5 269 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 ZNF486Q96H40 463 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 TP53RKQ96S44 253 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 TXN2Q99757 166 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 MS4A6AQ9H2W1 248 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 C11orf68Q9H3H3 251 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 VSIRQ9H7M9 311 aa8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 FAM212BQ9NTI7 297 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 PUS1Q9Y606 427 aaKnown RBP eCLIP8.84□□□□□ -0.99
SOX2-OT-228ENST00000597828 DEFA1P59665 94 aa8.83□□□□□ -1
SOX2-OT-228ENST00000597828 DEFA3P59666 94 aa8.83□□□□□ -1
SOX2-OT-228ENST00000597828 KLF9Q13886 244 aaPredicted RBP8.83□□□□□ -1
SOX2-OT-228ENST00000597828 RBMS2Q15434 407 aaKnown RBP8.83□□□□□ -1
SOX2-OT-228ENST00000597828 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
SOX2-OT-228ENST00000597828 FAAP20Q6NZ36 180 aa8.83□□□□□ -1
SOX2-OT-228ENST00000597828 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
SOX2-OT-228ENST00000597828 GINS3Q9BRX5 216 aa8.83□□□□□ -1
SOX2-OT-228ENST00000597828 KCNIP3Q9Y2W7 256 aa8.83□□□□□ -1
SOX2-OT-228ENST00000597828 A0A0G2JRQ6 117 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 TEX13DA0A0J9YY54 714 aaPredicted RBP8.82□□□□□ -1
SOX2-OT-228ENST00000597828 P0C879 139 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 RNASE2P10153 161 aaKnown RBP8.82□□□□□ -1
SOX2-OT-228ENST00000597828 AKR1C2P52895 323 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 RND3P61587 244 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 RPL11P62913 178 aaKnown RBP8.82□□□□□ -1
SOX2-OT-228ENST00000597828 ERHP84090 104 aaKnown RBP8.82□□□□□ -1
SOX2-OT-228ENST00000597828 SURF2Q15527 256 aaPredicted RBP8.82□□□□□ -1
SOX2-OT-228ENST00000597828 MLANAQ16655 118 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 ZNF600Q6ZNG1 722 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 SLC35G3Q8N808 338 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 MARCH1Q8TCQ1 289 aa8.82□□□□□ -1
SOX2-OT-228ENST00000597828 TRIM63Q969Q1 353 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms