RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NUPL2O15504 423 aaKnown RBP15□□□□□ -0.01
SHKBP1-214ENST00000597396 PRAF2O60831 178 aa15□□□□□ -0.01
SHKBP1-214ENST00000597396 PRB2P02812 416 aaPredicted RBP15□□□□□ -0.01
SHKBP1-214ENST00000597396 FCGR2BP31994 310 aaPredicted RBP15□□□□□ -0.01
SHKBP1-214ENST00000597396 REC114Q7Z4M0 266 aa15□□□□□ -0.01
SHKBP1-214ENST00000597396 OR10C1Q96KK4 312 aa15□□□□□ -0.01
SHKBP1-214ENST00000597396 CHRDL1Q9BU40 450 aa15□□□□□ -0.01
SHKBP1-214ENST00000597396 FNDC4Q9H6D8 234 aaPredicted RBP15□□□□□ -0.01
SHKBP1-214ENST00000597396 GSKIPQ9P0R6 139 aa15□□□□□ -0.01
SHKBP1-214ENST00000597396 LGALS9O00182 355 aa14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 SCGB1D2O95969 90 aa14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 IFNA4P05014 189 aa14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 ATP5IP56385 69 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 KRTAP10-11P60412 298 aa14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 ZBTB8BQ8NAP8 495 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 OR4D5Q8NGN0 318 aa14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 TMEM170AQ8WVE7 144 aa14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 MARVELD1Q9BSK0 173 aa14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 PAIP2BQ9ULR5 123 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-214ENST00000597396 C5orf51A6NDU8 294 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 CSN3P07498 182 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 ADMP35318 185 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 RAB11AP62491 216 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 ID3Q02535 119 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 RELQ04864 619 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 MLANAQ16655 118 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 ETFRF1Q6IPR1 90 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 PALMDQ9NP74 551 aa14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 AURKAIP1Q9NWT8 199 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 PRKDCP78527 4128 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-214ENST00000597396 SCGB2A1O75556 95 aa14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 LY86O95711 162 aa14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 CTSGP08311 255 aa14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 SLC25A4P12235 298 aa14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 POLR2GP62487 172 aaKnown RBP eCLIP14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 RPP30P78346 268 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 IL34Q6ZMJ4 242 aa14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 HAPLN4Q86UW8 402 aa14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 ZNF436Q9C0F3 470 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-214ENST00000597396 C2orf70A6NJV1 201 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 SNRPGP15A8MWD9 76 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 A8MWP6 167 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 NDUFA4O00483 81 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 SSSCA1O60232 199 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 SPNP16150 400 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 UNQ9165/PRO28630Q6UXU0 137 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 GSG1LQ6UXU4 331 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 OR4X1Q8NH49 305 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 DYNLRB2Q8TF09 96 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 TMEM190Q8WZ59 177 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 SIGLEC8Q9NYZ4 499 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 MRPL36Q9P0J6 103 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 UFC1Q9Y3C8 167 aa14.96□□□□□ -0.01
SHKBP1-214ENST00000597396 C15orf62A8K5M9 175 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 CLN5O75503 358 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 TMEM50AO95807 157 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 PTTG1O95997 202 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 IGLV1-51P01701 117 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 RND2P52198 227 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 SPANXN5Q5MJ07 72 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 SLC16A13Q7RTY0 426 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 C20orf24Q9BUV8 137 aa14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 ZNF256Q9Y2P7 627 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-214ENST00000597396 TMEM213A2RRL7 107 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 H3BP45 60 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 YIF1AO95070 293 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 FOLR2P14207 255 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 ELLP55199 621 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 CD69Q07108 199 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 TM4SF20Q53R12 229 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 PRSS54Q6PEW0 395 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 C2orf50Q96LR7 162 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 PSENENQ9NZ42 101 aa14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 STRAPQ9Y3F4 350 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-214ENST00000597396 TRAV30A0A087WSZ9 112 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 EDN2P20800 178 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 DCTN2Q13561 401 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 ZNF600Q6ZNG1 722 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 CACNG8Q8WXS5 425 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 ACY3Q96HD9 319 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 SLC35E1Q96K37 410 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 PRR25Q96S07 402 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 RAB40CQ96S21 281 aa14.93□□□□□ -0.02
SHKBP1-214ENST00000597396 IGHV3OR16-8A0A075B7F1 116 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 WI2-2373I1.2A0A1W2PRP0 233 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 MBPP02686 304 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 CBLN1P23435 193 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 ADAMTSL5Q6ZMM2 481 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 TMEM116Q8NCL8 245 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 MRAPQ8TCY5 172 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 MARC2Q969Z3 335 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 SMIM8Q96KF7 97 aa14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 DAZ1Q9NQZ3 744 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 RCL1Q9Y2P8 373 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 LSM5Q9Y4Y9 91 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-214ENST00000597396 L7N2F9 121 aa14.91□□□□□ -0.02
SHKBP1-214ENST00000597396 GOSR2O14653 212 aa14.91□□□□□ -0.02
SHKBP1-214ENST00000597396 SSNA1O43805 119 aa14.91□□□□□ -0.02
SHKBP1-214ENST00000597396 GPX4P36969 197 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-214ENST00000597396 VAMP2P63027 116 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms