RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 TOMM20LQ6UXN7 152 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 FAM219AQ8IW50 185 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 TMEM116Q8NCL8 245 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 GPR146Q96CH1 333 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 PRRT1Q99946 306 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 CACNG5Q9UF02 275 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 PUS1Q9Y606 427 aaKnown RBP eCLIP9.67□□□□□ -0.86
LIG1-212ENST00000596549 V9GYH0 126 aa9.67□□□□□ -0.86
LIG1-212ENST00000596549 NXPH3O95157 252 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 TMEM50AO95807 157 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 OPRK1P41145 380 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 SUPT4H1P63272 117 aaKnown RBP9.66□□□□□ -0.86
LIG1-212ENST00000596549 DHODHQ02127 395 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 TMEM187Q14656 261 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 ZNF79Q15937 498 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 MLANAQ16655 118 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 ZNF600Q6ZNG1 722 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 DUSP18Q8NEJ0 188 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 MCFD2Q8NI22 146 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 TMEM170AQ8WVE7 144 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 ST8SIA2Q92186 375 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 RBM38Q9H0Z9 239 aaKnown RBP9.66□□□□□ -0.86
LIG1-212ENST00000596549 RSL24D1Q9UHA3 163 aaKnown RBP9.66□□□□□ -0.86
LIG1-212ENST00000596549 TMEM56-RWDD3S4R434 201 aa9.66□□□□□ -0.86
LIG1-212ENST00000596549 IGKV3-7A0A075B6H7 116 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 TRAV14DV4A0A0A6YYC5 116 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 CLN5O75503 358 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 NPBWR1P48145 328 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 TFPI2P48307 235 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 SPCS3P61009 180 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 DEFB135Q30KP9 77 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 LILRB2Q8N423 598 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 GALNT14Q96FL9 552 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 GINS3Q9BRX5 216 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 VSIRQ9H7M9 311 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 MAP6D1Q9H9H5 199 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 ENY2Q9NPA8 101 aa9.65□□□□□ -0.86
LIG1-212ENST00000596549 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 FABP12A6NFH5 140 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 SUB1P53999 127 aaKnown RBP eCLIP9.64□□□□□ -0.87
LIG1-212ENST00000596549 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.87
LIG1-212ENST00000596549 KLF9Q13886 244 aaPredicted RBP9.64□□□□□ -0.87
LIG1-212ENST00000596549 NMSQ5H8A3 153 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 TCF24Q7RTU0 167 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 SLC24A4Q8NFF2 622 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 OR4X1Q8NH49 305 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 IL22RA2Q969J5 263 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.64□□□□□ -0.87
LIG1-212ENST00000596549 MCUBQ9NWR8 336 aa9.64□□□□□ -0.87
LIG1-212ENST00000596549 IGKV1-17P01599 117 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
LIG1-212ENST00000596549 HTR2BP41595 481 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 APOC4P55056 127 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 Q6ZWC4 215 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 WFDC3Q8IUB2 231 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 GBGT1Q8N5D6 347 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 FAM24BQ8N5W8 94 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 SCP2D1Q9UJQ7 156 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 TP53TG1Q9Y2A0 90 aa9.63□□□□□ -0.87
LIG1-212ENST00000596549 KIR2DL5BA0A0G2JN68 375 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 KIR2DL5BA0A0G2JPC4 375 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 DFFBO76075 338 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 IGLC1P0CG04 106 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 SULT1A3P0DMM9 295 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 TIGITQ495A1 244 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 PRSS54Q6PEW0 395 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 KIR2DL5AQ8N109 375 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 KIR2DL5BQ8NHK3 375 aa9.62□□□□□ -0.87
LIG1-212ENST00000596549 HEYLQ9NQ87 328 aaPredicted RBP9.62□□□□□ -0.87
LIG1-212ENST00000596549 A0A0B4J2A0 478 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 A0A0J9YWU9 116 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 CEBPZOSA8MTT3 80 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 SPRY2O43597 315 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 AKR1C4P17516 323 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 NPY1RP25929 384 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 RND2P52198 227 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 LYZL2Q7Z4W2 148 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 IL17DQ8TAD2 202 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 RNASEH2CQ8TDP1 164 aaKnown RBP9.61□□□□□ -0.87
LIG1-212ENST00000596549 MS4A6AQ9H2W1 248 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 HSPB7Q9UBY9 170 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 SHPKQ9UHJ6 478 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 DNAH1Q9P2D7 4330 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 HYDINQ4G0P3 5121 aa9.61□□□□□ -0.87
LIG1-212ENST00000596549 RPS10-NUDT3A0A1W2PQS6 291 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 CCDC160A6NGH7 325 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 UBE2CO00762 179 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 CRYBB3P26998 211 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 BMI1P35226 326 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 TNFRSF9Q07011 255 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 SMCO1Q147U7 214 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 PYDC2Q56P42 97 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 LYG2Q86SG7 212 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 CCDC190Q86UF4 302 aa9.6□□□□□ -0.87
LIG1-212ENST00000596549 RNF183Q96D59 192 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms