RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 OR52B4Q8NGK2 314 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 TMEM170AQ8WVE7 144 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 PINX1Q96BK5 328 aaKnown RBP12.04□□□□□ -0.48
USHBP1-206ENST00000596436 ZNF414Q96IQ9 312 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 NUDT15Q9NV35 164 aa12.04□□□□□ -0.48
USHBP1-206ENST00000596436 IGHV3-35A0A0C4DH35 117 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 CEBPZOSA8MTT3 80 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 TGOLN2O43493 480 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 ADMP35318 185 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 UNQ9165/PRO28630Q6UXU0 137 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 OR1S1Q8NH92 325 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 CHRDL1Q9BU40 450 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 RBKSQ9H477 322 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 HEYLQ9NQ87 328 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-206ENST00000596436 SIGLEC8Q9NYZ4 499 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
USHBP1-206ENST00000596436 PIGBOS1A0A0B4J2F0 54 aa12.02□□□□□ -0.49
USHBP1-206ENST00000596436 MPTX1A8MV57 137 aa12.02□□□□□ -0.49
USHBP1-206ENST00000596436 LGALS9O00182 355 aa12.02□□□□□ -0.49
USHBP1-206ENST00000596436 TATDN3Q17R31 274 aa12.02□□□□□ -0.49
USHBP1-206ENST00000596436 Q56UQ5 140 aa12.02□□□□□ -0.49
USHBP1-206ENST00000596436 PLET1Q6UQ28 207 aa12.02□□□□□ -0.49
USHBP1-206ENST00000596436 UBAC2Q8NBM4 344 aa12.02□□□□□ -0.49
USHBP1-206ENST00000596436 BSCL2Q96G97 398 aaPredicted RBP12.02□□□□□ -0.49
USHBP1-206ENST00000596436 FNDC4Q9H6D8 234 aaPredicted RBP12.02□□□□□ -0.49
USHBP1-206ENST00000596436 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.49
USHBP1-206ENST00000596436 FAM240BA0A1B0GVZ2 78 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 SLC25A6P12236 298 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 HTR2BP41595 481 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 MLANAQ16655 118 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 MZT2BQ6NZ67 158 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 LINC00322Q6ZN03 302 aaPredicted RBP12.01□□□□□ -0.49
USHBP1-206ENST00000596436 SLC24A4Q8NFF2 622 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 COQ8AQ8NI60 647 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 DTD1Q8TEA8 209 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 MITD1Q8WV92 249 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 CACNG8Q8WXS5 425 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 ATP6V0BQ99437 205 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 SEC22CQ9BRL7 303 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 ZNF436Q9C0F3 470 aaPredicted RBP12.01□□□□□ -0.49
USHBP1-206ENST00000596436 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
USHBP1-206ENST00000596436 TMEM213A2RRL7 107 aa12□□□□□ -0.49
USHBP1-206ENST00000596436 A8MWP6 167 aa12□□□□□ -0.49
USHBP1-206ENST00000596436 CTSGP08311 255 aa12□□□□□ -0.49
USHBP1-206ENST00000596436 H2AFB2P0C5Z0 115 aa12□□□□□ -0.49
USHBP1-206ENST00000596436 FCGR2BP31994 310 aaPredicted RBP12□□□□□ -0.49
USHBP1-206ENST00000596436 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.49
USHBP1-206ENST00000596436 MFAP4P55083 255 aa12□□□□□ -0.49
USHBP1-206ENST00000596436 C2orf83Q53S99 150 aa12□□□□□ -0.49
USHBP1-206ENST00000596436 CACFD1Q9UGQ2 172 aa12□□□□□ -0.49
USHBP1-206ENST00000596436 ZNF320A2RRD8 509 aa11.99□□□□□ -0.49
USHBP1-206ENST00000596436 CORTO00230 105 aa11.99□□□□□ -0.49
USHBP1-206ENST00000596436 NPY1RP25929 384 aa11.99□□□□□ -0.49
USHBP1-206ENST00000596436 FAM106AQ4KMX7 169 aa11.99□□□□□ -0.49
USHBP1-206ENST00000596436 SPSB3Q6PJ21 355 aa11.99□□□□□ -0.49
USHBP1-206ENST00000596436 TXN2Q99757 166 aa11.99□□□□□ -0.49
USHBP1-206ENST00000596436 HIPK2Q9H2X6 1198 aa11.99□□□□□ -0.49
USHBP1-206ENST00000596436 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 FAM90A26D6RGX4 464 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 IAPPP10997 89 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 FOLR2P14207 255 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 OPRK1P41145 380 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 TM4SF20Q53R12 229 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 ENKURQ8TC29 256 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 TMEM190Q8WZ59 177 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 MAGT1Q9H0U3 335 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
USHBP1-206ENST00000596436 IGHV3OR16-8A0A075B7F1 116 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 NDUFA4O00483 81 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 GNG7O60262 68 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 IFNA10P01566 189 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 CBLN1P23435 193 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 NRARPQ7Z6K4 114 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 DUSP18Q8NEJ0 188 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 OR4D5Q8NGN0 318 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 ZNF431Q8TF32 576 aaPredicted RBP11.97□□□□□ -0.49
USHBP1-206ENST00000596436 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
USHBP1-206ENST00000596436 C15orf62A8K5M9 175 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 CCSO14618 274 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 NUPL2O15504 423 aaKnown RBP11.96□□□□□ -0.49
USHBP1-206ENST00000596436 JTBO76095 146 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 TMEM50AO95807 157 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 IFNA21P01568 189 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 NPBWR1P48145 328 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 GTSCR1Q86UQ5 136 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 OR2K2Q8NGT1 345 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.49
USHBP1-206ENST00000596436 U3KQ87 197 aa11.96□□□□□ -0.49
USHBP1-206ENST00000596436 SYNGR2O43760 224 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 ID3Q02535 119 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 DEFB114Q30KQ6 69 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 CD300EQ496F6 205 aaPredicted RBP11.95□□□□□ -0.5
USHBP1-206ENST00000596436 PRSS54Q6PEW0 395 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 UXS1Q8NBZ7 420 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 OR4X1Q8NH49 305 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 IL17DQ8TAD2 202 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 C20orf24Q9BUV8 137 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms