RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 F8W735 103 aaPredicted RBP13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 PITX3O75364 302 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 IFNA10P01566 189 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 GGNBP1Q5YKI7 109 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 HAPLN4Q86UW8 402 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 RBKSQ9H477 322 aa13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 LSM4Q9Y4Z0 139 aaKnown RBP13.12□□□□□ -0.31
SHKBP1-212ENST00000596163 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
SHKBP1-212ENST00000596163 NPY1RP25929 384 aa13.11□□□□□ -0.31
SHKBP1-212ENST00000596163 ADMP35318 185 aa13.11□□□□□ -0.31
SHKBP1-212ENST00000596163 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
SHKBP1-212ENST00000596163 UNQ9165/PRO28630Q6UXU0 137 aa13.11□□□□□ -0.31
SHKBP1-212ENST00000596163 UXS1Q8NBZ7 420 aa13.11□□□□□ -0.31
SHKBP1-212ENST00000596163 SMAD5-AS1Q9Y6J3 95 aa13.11□□□□□ -0.31
SHKBP1-212ENST00000596163 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 TMEM213A2RRL7 107 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 K7EMT4 169 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 UPK1BO75841 260 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 TMEM50AO95807 157 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 SLC25A4P12235 298 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 ASAH1Q13510 395 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 TM4SF20Q53R12 229 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 ADAMTSL5Q6ZMM2 481 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 GTSCR1Q86UQ5 136 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 OR4X1Q8NH49 305 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 CIB3Q96Q77 187 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 C20orf24Q9BUV8 137 aa13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-212ENST00000596163 CLN5O75503 358 aa13.09□□□□□ -0.31
SHKBP1-212ENST00000596163 YIF1AO95070 293 aa13.09□□□□□ -0.31
SHKBP1-212ENST00000596163 H2AFB2P0C5Z0 115 aa13.09□□□□□ -0.31
SHKBP1-212ENST00000596163 C8orf88P0DMB2 117 aa13.09□□□□□ -0.31
SHKBP1-212ENST00000596163 CD300EQ496F6 205 aaPredicted RBP13.09□□□□□ -0.31
SHKBP1-212ENST00000596163 MITD1Q8WV92 249 aa13.09□□□□□ -0.31
SHKBP1-212ENST00000596163 NUDT15Q9NV35 164 aa13.09□□□□□ -0.31
SHKBP1-212ENST00000596163 TRAV6A0A075B6T7 132 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 C15orf62A8K5M9 175 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 IFNA4P05014 189 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 RAB11AP62491 216 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 CD69Q07108 199 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 ZNF600Q6ZNG1 722 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 GINS3Q9BRX5 216 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 FNDC4Q9H6D8 234 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 TBC1D24Q9ULP9 559 aa13.08□□□□□ -0.32
SHKBP1-212ENST00000596163 TRAV25A0A0B4J276 109 aa13.07□□□□□ -0.32
SHKBP1-212ENST00000596163 SYNGR2O43760 224 aa13.07□□□□□ -0.32
SHKBP1-212ENST00000596163 ADAP1O75689 374 aa13.07□□□□□ -0.32
SHKBP1-212ENST00000596163 MLANAQ16655 118 aa13.07□□□□□ -0.32
SHKBP1-212ENST00000596163 RBPMS2Q6ZRY4 209 aaKnown RBP13.07□□□□□ -0.32
SHKBP1-212ENST00000596163 ENKURQ8TC29 256 aa13.07□□□□□ -0.32
SHKBP1-212ENST00000596163 CACNG8Q8WXS5 425 aa13.07□□□□□ -0.32
SHKBP1-212ENST00000596163 WRBO00258 174 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 BMI1P35226 326 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 DEFA1P59665 94 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 DEFA3P59666 94 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 GUCA2BQ16661 112 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 LAMTOR1Q6IAA8 161 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 OR1S2Q8NGQ3 325 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 ZNF431Q8TF32 576 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 MLXQ9UH92 298 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 TGP01266 2768 aa13.06□□□□□ -0.32
SHKBP1-212ENST00000596163 SORL1Q92673 2214 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 TRAV14DV4A0A0A6YYC5 116 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 IZUMO1RA6ND01 250 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 IAPPP10997 89 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 EDN2P20800 178 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 NKX2-1P43699 371 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 ID3Q02535 119 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 PRSS54Q6PEW0 395 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 BTNL8Q6UX41 500 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 TMEM116Q8NCL8 245 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 TMEM170AQ8WVE7 144 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 OR10C1Q96KK4 312 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 MAGT1Q9H0U3 335 aa13.05□□□□□ -0.32
SHKBP1-212ENST00000596163 PRKDCP78527 4128 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 NHLRC4P0CG21 123 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 RND2P52198 227 aa13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 IAH1Q2TAA2 248 aaPredicted RBP13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 TOMM20LQ6UXN7 152 aa13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 Q8N1Y9 231 aa13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 SMPXQ9UHP9 88 aa13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 PAIP2BQ9ULR5 123 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHKBP1-212ENST00000596163 IGHV3OR16-8A0A075B7F1 116 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 ZNF207O43670 478 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 IL5P05113 134 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 OR10J1P30954 320 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 SLC16A13Q7RTY0 426 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 C12orf45Q8N5I9 185 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms